This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
ALA 2
-0.0690
ALA 2
GLU 3
0.0894
GLU 3
PHE 4
-0.0947
PHE 4
ARG 5
-0.1192
ARG 5
HIS 6
0.1035
HIS 6
ASP 7
-0.1035
ASP 7
SER 8
-0.1026
SER 8
GLY 9
0.2267
GLY 9
TYR 10
0.0991
TYR 10
GLU 11
0.0037
GLU 11
VAL 12
-0.1605
VAL 12
HIS 13
0.0859
HIS 13
HIS 14
-0.1390
HIS 14
GLN 15
-0.0172
GLN 15
LYS 16
0.1339
LYS 16
LEU 17
-0.0455
LEU 17
VAL 18
0.0273
VAL 18
PHE 19
-0.0010
PHE 19
PHE 20
-0.0713
PHE 20
ALA 21
0.0687
ALA 21
GLU 22
-0.1578
GLU 22
ASP 23
-0.0049
ASP 23
VAL 24
0.0346
VAL 24
GLY 25
0.0314
GLY 25
SER 26
0.0582
SER 26
ASN 27
-0.0742
ASN 27
LYS 28
0.0201
LYS 28
GLY 29
-0.1132
GLY 29
ALA 30
-0.3544
ALA 30
ILE 31
0.0494
ILE 31
ILE 32
-0.0456
ILE 32
GLY 33
0.1660
GLY 33
LEU 34
0.2730
LEU 34
MET 35
0.0319
MET 35
VAL 36
0.0534
VAL 36
GLY 37
-0.1476
GLY 37
GLY 38
-0.1843
GLY 38
VAL 39
0.1286
VAL 39
VAL 40
-0.1984
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elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.