CNRS Nantes University US2B US2B
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***  conf_2  ***

CA strain for 2404230347251977942

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.0385
ALA 2GLU 3 -0.0387
GLU 3PHE 4 0.1283
PHE 4ARG 5 -0.0505
ARG 5HIS 6 0.1872
HIS 6ASP 7 0.1775
ASP 7SER 8 0.1016
SER 8GLY 9 -0.2354
GLY 9TYR 10 0.1694
TYR 10GLU 11 -0.1466
GLU 11VAL 12 0.0376
VAL 12HIS 13 -0.3088
HIS 13HIS 14 0.2012
HIS 14GLN 15 -0.1417
GLN 15LYS 16 0.1042
LYS 16LEU 17 0.0254
LEU 17VAL 18 -0.0308
VAL 18PHE 19 0.0826
PHE 19PHE 20 -0.1823
PHE 20ALA 21 0.0922
ALA 21GLU 22 -0.1350
GLU 22ASP 23 -0.1109
ASP 23VAL 24 0.0739
VAL 24GLY 25 -0.0775
GLY 25SER 26 -0.0535
SER 26ASN 27 0.0404
ASN 27LYS 28 -0.1180
LYS 28GLY 29 -0.1368
GLY 29ALA 30 -0.4352
ALA 30ILE 31 0.1163
ILE 31ILE 32 -0.1169
ILE 32GLY 33 -0.2764
GLY 33LEU 34 0.5707
LEU 34MET 35 -0.3458
MET 35VAL 36 -0.0068
VAL 36GLY 37 -0.4750
GLY 37GLY 38 -0.1246
GLY 38VAL 39 -0.5613
VAL 39VAL 40 0.3630

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.