CNRS Nantes University US2B US2B
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***  conf_2  ***

CA strain for 2404230347251977942

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.0187
ALA 2GLU 3 -0.1003
GLU 3PHE 4 -0.1524
PHE 4ARG 5 -0.0109
ARG 5HIS 6 0.1738
HIS 6ASP 7 0.0048
ASP 7SER 8 -0.2372
SER 8GLY 9 0.3668
GLY 9TYR 10 0.4125
TYR 10GLU 11 -0.2070
GLU 11VAL 12 -0.0750
VAL 12HIS 13 0.2764
HIS 13HIS 14 -0.8256
HIS 14GLN 15 0.0225
GLN 15LYS 16 0.0095
LYS 16LEU 17 0.0602
LEU 17VAL 18 -0.1756
VAL 18PHE 19 -0.0400
PHE 19PHE 20 -0.0203
PHE 20ALA 21 0.1256
ALA 21GLU 22 -0.5056
GLU 22ASP 23 0.0588
ASP 23VAL 24 -0.1986
VAL 24GLY 25 0.4629
GLY 25SER 26 -0.1163
SER 26ASN 27 -0.0009
ASN 27LYS 28 -0.1283
LYS 28GLY 29 -0.0434
GLY 29ALA 30 -0.1178
ALA 30ILE 31 -0.1605
ILE 31ILE 32 -0.0127
ILE 32GLY 33 -0.1700
GLY 33LEU 34 -0.1643
LEU 34MET 35 -0.0577
MET 35VAL 36 -0.1101
VAL 36GLY 37 0.3031
GLY 37GLY 38 0.2703
GLY 38VAL 39 0.2147
VAL 39VAL 40 0.0271

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.