This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0910
VAL 2
PHE 3
0.0995
PHE 3
GLY 4
-0.0438
GLY 4
ARG 5
-0.0157
ARG 5
CYS 6
0.0080
CYS 6
GLU 7
0.0442
GLU 7
LEU 8
-0.0304
LEU 8
ALA 9
0.0714
ALA 9
ALA 10
-0.0220
ALA 10
ALA 11
-0.0608
ALA 11
MET 12
0.0423
MET 12
LYS 13
-0.0062
LYS 13
ARG 14
0.0188
ARG 14
HIS 15
-0.1187
HIS 15
GLY 16
0.2238
GLY 16
LEU 17
-0.0115
LEU 17
ASP 18
-0.0291
ASP 18
ASN 19
0.0356
ASN 19
TYR 20
-0.1128
TYR 20
ARG 21
0.0446
ARG 21
GLY 22
-0.0601
GLY 22
TYR 23
-0.0232
TYR 23
SER 24
0.0115
SER 24
LEU 25
0.0418
LEU 25
GLY 26
-0.0233
GLY 26
ASN 27
0.0283
ASN 27
TRP 28
0.0120
TRP 28
VAL 29
0.0191
VAL 29
CYS 30
0.0044
CYS 30
ALA 31
0.0175
ALA 31
ALA 32
-0.0493
ALA 32
LYS 33
0.0308
LYS 33
PHE 34
-0.0269
PHE 34
GLU 35
0.0886
GLU 35
SER 36
-0.2627
SER 36
ASN 37
0.1797
ASN 37
PHE 38
-0.0097
PHE 38
ASN 39
0.0926
ASN 39
THR 40
-0.1490
THR 40
GLN 41
0.0640
GLN 41
ALA 42
0.0411
ALA 42
THR 43
0.3349
THR 43
ASN 44
0.2807
ASN 44
ARG 45
0.0645
ARG 45
ASN 46
0.0261
ASN 46
THR 47
-0.1172
THR 47
ASP 48
-0.0151
ASP 48
GLY 49
0.0028
GLY 49
SER 50
-0.0896
SER 50
THR 51
0.1079
THR 51
ASP 52
-0.0316
ASP 52
TYR 53
0.0200
TYR 53
GLY 54
0.0896
GLY 54
ILE 55
0.0670
ILE 55
LEU 56
-0.0440
LEU 56
GLN 57
-0.1481
GLN 57
ILE 58
0.2372
ILE 58
ASN 59
-0.0673
ASN 59
SER 60
-0.0250
SER 60
ARG 61
0.1333
ARG 61
TRP 62
-0.1667
TRP 62
TRP 63
-0.0615
TRP 63
CYS 64
-0.0174
CYS 64
ASN 65
0.0348
ASN 65
ASP 66
0.0816
ASP 66
GLY 67
-0.0444
GLY 67
ARG 68
0.0643
ARG 68
THR 69
-0.0921
THR 69
PRO 70
0.0264
PRO 70
GLY 71
-0.0625
GLY 71
SER 72
-0.0298
SER 72
ARG 73
-0.0052
ARG 73
ASN 74
-0.1785
ASN 74
LEU 75
0.0898
LEU 75
CYS 76
-0.2181
CYS 76
ASN 77
0.0655
ASN 77
ILE 78
-0.1442
ILE 78
PRO 79
0.1146
PRO 79
CYS 80
0.0125
CYS 80
SER 81
-0.0129
SER 81
ALA 82
0.2209
ALA 82
LEU 83
-0.0639
LEU 83
LEU 84
-0.0805
LEU 84
SER 85
0.2080
SER 85
SER 86
-0.2063
SER 86
ASP 87
0.0163
ASP 87
ILE 88
-0.0053
ILE 88
THR 89
-0.0448
THR 89
ALA 90
-0.0831
ALA 90
SER 91
-0.0470
SER 91
VAL 92
0.0301
VAL 92
ASN 93
-0.0737
ASN 93
CYS 94
-0.2715
CYS 94
ALA 95
0.0778
ALA 95
LYS 96
-0.0684
LYS 96
LYS 97
-0.2099
LYS 97
ILE 98
0.3553
ILE 98
VAL 99
-0.1605
VAL 99
SER 100
0.0119
SER 100
ASP 101
-0.0759
ASP 101
GLY 102
-0.0376
GLY 102
ASN 103
0.0120
ASN 103
GLY 104
0.0156
GLY 104
MET 105
0.0138
MET 105
ASN 106
-0.0031
ASN 106
ALA 107
0.1430
ALA 107
TRP 108
-0.0379
TRP 108
VAL 109
0.1395
VAL 109
ALA 110
-0.0124
ALA 110
TRP 111
-0.0267
TRP 111
ARG 112
-0.0354
ARG 112
ASN 113
0.0587
ASN 113
ARG 114
-0.0057
ARG 114
CYS 115
0.0006
CYS 115
LYS 116
-0.0211
LYS 116
GLY 117
0.0265
GLY 117
THR 118
0.0167
THR 118
ASP 119
0.0380
ASP 119
VAL 120
-0.0129
VAL 120
GLN 121
0.0299
GLN 121
ALA 122
-0.0269
ALA 122
TRP 123
-0.0089
TRP 123
ILE 124
0.0313
ILE 124
ARG 125
-0.0587
ARG 125
GLY 126
0.2164
GLY 126
CYS 127
-0.1425
CYS 127
ARG 128
0.0743
ARG 128
LEU 129
0.0499
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.