CNRS Nantes University US2B US2B
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***  HYDROLASE 01-FEB-75 1LYZ  ***

CA strain for 2404221630241904959

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0910
VAL 2PHE 3 0.0995
PHE 3GLY 4 -0.0438
GLY 4ARG 5 -0.0157
ARG 5CYS 6 0.0080
CYS 6GLU 7 0.0442
GLU 7LEU 8 -0.0304
LEU 8ALA 9 0.0714
ALA 9ALA 10 -0.0220
ALA 10ALA 11 -0.0608
ALA 11MET 12 0.0423
MET 12LYS 13 -0.0062
LYS 13ARG 14 0.0188
ARG 14HIS 15 -0.1187
HIS 15GLY 16 0.2238
GLY 16LEU 17 -0.0115
LEU 17ASP 18 -0.0291
ASP 18ASN 19 0.0356
ASN 19TYR 20 -0.1128
TYR 20ARG 21 0.0446
ARG 21GLY 22 -0.0601
GLY 22TYR 23 -0.0232
TYR 23SER 24 0.0115
SER 24LEU 25 0.0418
LEU 25GLY 26 -0.0233
GLY 26ASN 27 0.0283
ASN 27TRP 28 0.0120
TRP 28VAL 29 0.0191
VAL 29CYS 30 0.0044
CYS 30ALA 31 0.0175
ALA 31ALA 32 -0.0493
ALA 32LYS 33 0.0308
LYS 33PHE 34 -0.0269
PHE 34GLU 35 0.0886
GLU 35SER 36 -0.2627
SER 36ASN 37 0.1797
ASN 37PHE 38 -0.0097
PHE 38ASN 39 0.0926
ASN 39THR 40 -0.1490
THR 40GLN 41 0.0640
GLN 41ALA 42 0.0411
ALA 42THR 43 0.3349
THR 43ASN 44 0.2807
ASN 44ARG 45 0.0645
ARG 45ASN 46 0.0261
ASN 46THR 47 -0.1172
THR 47ASP 48 -0.0151
ASP 48GLY 49 0.0028
GLY 49SER 50 -0.0896
SER 50THR 51 0.1079
THR 51ASP 52 -0.0316
ASP 52TYR 53 0.0200
TYR 53GLY 54 0.0896
GLY 54ILE 55 0.0670
ILE 55LEU 56 -0.0440
LEU 56GLN 57 -0.1481
GLN 57ILE 58 0.2372
ILE 58ASN 59 -0.0673
ASN 59SER 60 -0.0250
SER 60ARG 61 0.1333
ARG 61TRP 62 -0.1667
TRP 62TRP 63 -0.0615
TRP 63CYS 64 -0.0174
CYS 64ASN 65 0.0348
ASN 65ASP 66 0.0816
ASP 66GLY 67 -0.0444
GLY 67ARG 68 0.0643
ARG 68THR 69 -0.0921
THR 69PRO 70 0.0264
PRO 70GLY 71 -0.0625
GLY 71SER 72 -0.0298
SER 72ARG 73 -0.0052
ARG 73ASN 74 -0.1785
ASN 74LEU 75 0.0898
LEU 75CYS 76 -0.2181
CYS 76ASN 77 0.0655
ASN 77ILE 78 -0.1442
ILE 78PRO 79 0.1146
PRO 79CYS 80 0.0125
CYS 80SER 81 -0.0129
SER 81ALA 82 0.2209
ALA 82LEU 83 -0.0639
LEU 83LEU 84 -0.0805
LEU 84SER 85 0.2080
SER 85SER 86 -0.2063
SER 86ASP 87 0.0163
ASP 87ILE 88 -0.0053
ILE 88THR 89 -0.0448
THR 89ALA 90 -0.0831
ALA 90SER 91 -0.0470
SER 91VAL 92 0.0301
VAL 92ASN 93 -0.0737
ASN 93CYS 94 -0.2715
CYS 94ALA 95 0.0778
ALA 95LYS 96 -0.0684
LYS 96LYS 97 -0.2099
LYS 97ILE 98 0.3553
ILE 98VAL 99 -0.1605
VAL 99SER 100 0.0119
SER 100ASP 101 -0.0759
ASP 101GLY 102 -0.0376
GLY 102ASN 103 0.0120
ASN 103GLY 104 0.0156
GLY 104MET 105 0.0138
MET 105ASN 106 -0.0031
ASN 106ALA 107 0.1430
ALA 107TRP 108 -0.0379
TRP 108VAL 109 0.1395
VAL 109ALA 110 -0.0124
ALA 110TRP 111 -0.0267
TRP 111ARG 112 -0.0354
ARG 112ASN 113 0.0587
ASN 113ARG 114 -0.0057
ARG 114CYS 115 0.0006
CYS 115LYS 116 -0.0211
LYS 116GLY 117 0.0265
GLY 117THR 118 0.0167
THR 118ASP 119 0.0380
ASP 119VAL 120 -0.0129
VAL 120GLN 121 0.0299
GLN 121ALA 122 -0.0269
ALA 122TRP 123 -0.0089
TRP 123ILE 124 0.0313
ILE 124ARG 125 -0.0587
ARG 125GLY 126 0.2164
GLY 126CYS 127 -0.1425
CYS 127ARG 128 0.0743
ARG 128LEU 129 0.0499

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.