This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0546
VAL 2
PHE 3
-0.0554
PHE 3
GLY 4
0.0308
GLY 4
ARG 5
0.1235
ARG 5
CYS 6
-0.3792
CYS 6
GLU 7
0.0451
GLU 7
LEU 8
-0.0140
LEU 8
ALA 9
-0.0242
ALA 9
ALA 10
0.0248
ALA 10
ALA 11
0.0267
ALA 11
MET 12
-0.0624
MET 12
LYS 13
0.0377
LYS 13
ARG 14
0.0256
ARG 14
HIS 15
0.0744
HIS 15
GLY 16
0.0046
GLY 16
LEU 17
0.0005
LEU 17
ASP 18
0.0477
ASP 18
ASN 19
-0.0078
ASN 19
TYR 20
0.0586
TYR 20
ARG 21
-0.0397
ARG 21
GLY 22
-0.0033
GLY 22
TYR 23
0.0031
TYR 23
SER 24
-0.0046
SER 24
LEU 25
-0.0006
LEU 25
GLY 26
0.0280
GLY 26
ASN 27
-0.0004
ASN 27
TRP 28
0.0115
TRP 28
VAL 29
0.0132
VAL 29
CYS 30
0.0293
CYS 30
ALA 31
-0.1137
ALA 31
ALA 32
0.0712
ALA 32
LYS 33
-0.0058
LYS 33
PHE 34
0.0372
PHE 34
GLU 35
-0.2804
GLU 35
SER 36
0.1758
SER 36
ASN 37
-0.1384
ASN 37
PHE 38
-0.0120
PHE 38
ASN 39
-0.0817
ASN 39
THR 40
0.0679
THR 40
GLN 41
-0.0008
GLN 41
ALA 42
-0.0557
ALA 42
THR 43
-0.1499
THR 43
ASN 44
0.0015
ASN 44
ARG 45
-0.1340
ARG 45
ASN 46
-0.0155
ASN 46
THR 47
-0.1438
THR 47
ASP 48
0.0693
ASP 48
GLY 49
0.0405
GLY 49
SER 50
-0.0644
SER 50
THR 51
-0.0074
THR 51
ASP 52
-0.1653
ASP 52
TYR 53
-0.0261
TYR 53
GLY 54
-0.0343
GLY 54
ILE 55
0.0072
ILE 55
LEU 56
-0.0061
LEU 56
GLN 57
-0.1595
GLN 57
ILE 58
-0.0975
ILE 58
ASN 59
-0.1773
ASN 59
SER 60
-0.1114
SER 60
ARG 61
0.0086
ARG 61
TRP 62
0.0158
TRP 62
TRP 63
0.0469
TRP 63
CYS 64
-0.0914
CYS 64
ASN 65
-0.0779
ASN 65
ASP 66
-0.0265
ASP 66
GLY 67
0.0670
GLY 67
ARG 68
0.0076
ARG 68
THR 69
-0.0639
THR 69
PRO 70
-0.0202
PRO 70
GLY 71
-0.0148
GLY 71
SER 72
0.1086
SER 72
ARG 73
-0.0143
ARG 73
ASN 74
0.1550
ASN 74
LEU 75
-0.0109
LEU 75
CYS 76
0.0991
CYS 76
ASN 77
0.0866
ASN 77
ILE 78
0.0212
ILE 78
PRO 79
0.0674
PRO 79
CYS 80
-0.1348
CYS 80
SER 81
0.0334
SER 81
ALA 82
0.1566
ALA 82
LEU 83
-0.1398
LEU 83
LEU 84
-0.0139
LEU 84
SER 85
-0.0130
SER 85
SER 86
0.2356
SER 86
ASP 87
-0.1019
ASP 87
ILE 88
-0.0397
ILE 88
THR 89
-0.0083
THR 89
ALA 90
0.2905
ALA 90
SER 91
0.0213
SER 91
VAL 92
0.1075
VAL 92
ASN 93
0.0214
ASN 93
CYS 94
0.1341
CYS 94
ALA 95
0.1081
ALA 95
LYS 96
-0.0012
LYS 96
LYS 97
0.0569
LYS 97
ILE 98
-0.0400
ILE 98
VAL 99
-0.1054
VAL 99
SER 100
0.0379
SER 100
ASP 101
-0.0146
ASP 101
GLY 102
-0.0193
GLY 102
ASN 103
0.0211
ASN 103
GLY 104
0.0086
GLY 104
MET 105
0.0229
MET 105
ASN 106
0.0039
ASN 106
ALA 107
-0.1783
ALA 107
TRP 108
0.0372
TRP 108
VAL 109
-0.0561
VAL 109
ALA 110
0.0354
ALA 110
TRP 111
0.0136
TRP 111
ARG 112
0.0332
ARG 112
ASN 113
0.0027
ASN 113
ARG 114
0.0181
ARG 114
CYS 115
0.0234
CYS 115
LYS 116
0.0257
LYS 116
GLY 117
-0.0283
GLY 117
THR 118
-0.0065
THR 118
ASP 119
-0.0071
ASP 119
VAL 120
0.0058
VAL 120
GLN 121
-0.0118
GLN 121
ALA 122
-0.0094
ALA 122
TRP 123
-0.0123
TRP 123
ILE 124
-0.0022
ILE 124
ARG 125
-0.0158
ARG 125
GLY 126
0.3322
GLY 126
CYS 127
-0.1791
CYS 127
ARG 128
0.1143
ARG 128
LEU 129
0.4410
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.