CNRS Nantes University US2B US2B
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***  HYDROLASE 01-FEB-75 1LYZ  ***

CA strain for 2404221630241904959

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.0546
VAL 2PHE 3 -0.0554
PHE 3GLY 4 0.0308
GLY 4ARG 5 0.1235
ARG 5CYS 6 -0.3792
CYS 6GLU 7 0.0451
GLU 7LEU 8 -0.0140
LEU 8ALA 9 -0.0242
ALA 9ALA 10 0.0248
ALA 10ALA 11 0.0267
ALA 11MET 12 -0.0624
MET 12LYS 13 0.0377
LYS 13ARG 14 0.0256
ARG 14HIS 15 0.0744
HIS 15GLY 16 0.0046
GLY 16LEU 17 0.0005
LEU 17ASP 18 0.0477
ASP 18ASN 19 -0.0078
ASN 19TYR 20 0.0586
TYR 20ARG 21 -0.0397
ARG 21GLY 22 -0.0033
GLY 22TYR 23 0.0031
TYR 23SER 24 -0.0046
SER 24LEU 25 -0.0006
LEU 25GLY 26 0.0280
GLY 26ASN 27 -0.0004
ASN 27TRP 28 0.0115
TRP 28VAL 29 0.0132
VAL 29CYS 30 0.0293
CYS 30ALA 31 -0.1137
ALA 31ALA 32 0.0712
ALA 32LYS 33 -0.0058
LYS 33PHE 34 0.0372
PHE 34GLU 35 -0.2804
GLU 35SER 36 0.1758
SER 36ASN 37 -0.1384
ASN 37PHE 38 -0.0120
PHE 38ASN 39 -0.0817
ASN 39THR 40 0.0679
THR 40GLN 41 -0.0008
GLN 41ALA 42 -0.0557
ALA 42THR 43 -0.1499
THR 43ASN 44 0.0015
ASN 44ARG 45 -0.1340
ARG 45ASN 46 -0.0155
ASN 46THR 47 -0.1438
THR 47ASP 48 0.0693
ASP 48GLY 49 0.0405
GLY 49SER 50 -0.0644
SER 50THR 51 -0.0074
THR 51ASP 52 -0.1653
ASP 52TYR 53 -0.0261
TYR 53GLY 54 -0.0343
GLY 54ILE 55 0.0072
ILE 55LEU 56 -0.0061
LEU 56GLN 57 -0.1595
GLN 57ILE 58 -0.0975
ILE 58ASN 59 -0.1773
ASN 59SER 60 -0.1114
SER 60ARG 61 0.0086
ARG 61TRP 62 0.0158
TRP 62TRP 63 0.0469
TRP 63CYS 64 -0.0914
CYS 64ASN 65 -0.0779
ASN 65ASP 66 -0.0265
ASP 66GLY 67 0.0670
GLY 67ARG 68 0.0076
ARG 68THR 69 -0.0639
THR 69PRO 70 -0.0202
PRO 70GLY 71 -0.0148
GLY 71SER 72 0.1086
SER 72ARG 73 -0.0143
ARG 73ASN 74 0.1550
ASN 74LEU 75 -0.0109
LEU 75CYS 76 0.0991
CYS 76ASN 77 0.0866
ASN 77ILE 78 0.0212
ILE 78PRO 79 0.0674
PRO 79CYS 80 -0.1348
CYS 80SER 81 0.0334
SER 81ALA 82 0.1566
ALA 82LEU 83 -0.1398
LEU 83LEU 84 -0.0139
LEU 84SER 85 -0.0130
SER 85SER 86 0.2356
SER 86ASP 87 -0.1019
ASP 87ILE 88 -0.0397
ILE 88THR 89 -0.0083
THR 89ALA 90 0.2905
ALA 90SER 91 0.0213
SER 91VAL 92 0.1075
VAL 92ASN 93 0.0214
ASN 93CYS 94 0.1341
CYS 94ALA 95 0.1081
ALA 95LYS 96 -0.0012
LYS 96LYS 97 0.0569
LYS 97ILE 98 -0.0400
ILE 98VAL 99 -0.1054
VAL 99SER 100 0.0379
SER 100ASP 101 -0.0146
ASP 101GLY 102 -0.0193
GLY 102ASN 103 0.0211
ASN 103GLY 104 0.0086
GLY 104MET 105 0.0229
MET 105ASN 106 0.0039
ASN 106ALA 107 -0.1783
ALA 107TRP 108 0.0372
TRP 108VAL 109 -0.0561
VAL 109ALA 110 0.0354
ALA 110TRP 111 0.0136
TRP 111ARG 112 0.0332
ARG 112ASN 113 0.0027
ASN 113ARG 114 0.0181
ARG 114CYS 115 0.0234
CYS 115LYS 116 0.0257
LYS 116GLY 117 -0.0283
GLY 117THR 118 -0.0065
THR 118ASP 119 -0.0071
ASP 119VAL 120 0.0058
VAL 120GLN 121 -0.0118
GLN 121ALA 122 -0.0094
ALA 122TRP 123 -0.0123
TRP 123ILE 124 -0.0022
ILE 124ARG 125 -0.0158
ARG 125GLY 126 0.3322
GLY 126CYS 127 -0.1791
CYS 127ARG 128 0.1143
ARG 128LEU 129 0.4410

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.