This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0211
VAL 2
PHE 3
0.0268
PHE 3
GLY 4
0.0935
GLY 4
ARG 5
0.0486
ARG 5
CYS 6
0.3028
CYS 6
GLU 7
0.1466
GLU 7
LEU 8
0.0173
LEU 8
ALA 9
0.0324
ALA 9
ALA 10
-0.0155
ALA 10
ALA 11
0.2284
ALA 11
MET 12
-0.0529
MET 12
LYS 13
-0.0281
LYS 13
ARG 14
0.0425
ARG 14
HIS 15
0.0369
HIS 15
GLY 16
0.0528
GLY 16
LEU 17
0.0068
LEU 17
ASP 18
0.0170
ASP 18
ASN 19
-0.0192
ASN 19
TYR 20
0.0057
TYR 20
ARG 21
-0.0296
ARG 21
GLY 22
-0.0382
GLY 22
TYR 23
0.0042
TYR 23
SER 24
-0.0495
SER 24
LEU 25
-0.0184
LEU 25
GLY 26
0.0434
GLY 26
ASN 27
-0.0466
ASN 27
TRP 28
0.0216
TRP 28
VAL 29
0.0329
VAL 29
CYS 30
0.0571
CYS 30
ALA 31
-0.0878
ALA 31
ALA 32
0.0421
ALA 32
LYS 33
-0.0008
LYS 33
PHE 34
0.0433
PHE 34
GLU 35
-0.2070
GLU 35
SER 36
0.0688
SER 36
ASN 37
-0.0416
ASN 37
PHE 38
-0.0067
PHE 38
ASN 39
0.0522
ASN 39
THR 40
-0.0006
THR 40
GLN 41
0.0196
GLN 41
ALA 42
-0.0534
ALA 42
THR 43
0.0183
THR 43
ASN 44
0.0587
ASN 44
ARG 45
-0.0573
ARG 45
ASN 46
0.0014
ASN 46
THR 47
-0.1104
THR 47
ASP 48
0.0362
ASP 48
GLY 49
0.0291
GLY 49
SER 50
-0.0578
SER 50
THR 51
0.0246
THR 51
ASP 52
-0.1062
ASP 52
TYR 53
-0.0165
TYR 53
GLY 54
0.0387
GLY 54
ILE 55
0.0664
ILE 55
LEU 56
-0.0149
LEU 56
GLN 57
-0.1194
GLN 57
ILE 58
-0.0261
ILE 58
ASN 59
-0.1321
ASN 59
SER 60
-0.0862
SER 60
ARG 61
0.0429
ARG 61
TRP 62
-0.0229
TRP 62
TRP 63
0.0357
TRP 63
CYS 64
-0.0955
CYS 64
ASN 65
-0.0668
ASN 65
ASP 66
-0.0182
ASP 66
GLY 67
0.0673
GLY 67
ARG 68
0.0081
ARG 68
THR 69
-0.0665
THR 69
PRO 70
0.0054
PRO 70
GLY 71
-0.0257
GLY 71
SER 72
0.0876
SER 72
ARG 73
-0.0225
ARG 73
ASN 74
0.1103
ASN 74
LEU 75
-0.0123
LEU 75
CYS 76
0.0453
CYS 76
ASN 77
0.0681
ASN 77
ILE 78
0.0055
ILE 78
PRO 79
0.0608
PRO 79
CYS 80
-0.1103
CYS 80
SER 81
0.0237
SER 81
ALA 82
0.1366
ALA 82
LEU 83
-0.1205
LEU 83
LEU 84
-0.0195
LEU 84
SER 85
0.0035
SER 85
SER 86
0.1969
SER 86
ASP 87
-0.1049
ASP 87
ILE 88
-0.0218
ILE 88
THR 89
-0.0085
THR 89
ALA 90
0.2143
ALA 90
SER 91
-0.0016
SER 91
VAL 92
0.0868
VAL 92
ASN 93
0.0163
ASN 93
CYS 94
0.0622
CYS 94
ALA 95
0.0799
ALA 95
LYS 96
-0.0128
LYS 96
LYS 97
0.0005
LYS 97
ILE 98
0.0170
ILE 98
VAL 99
-0.1303
VAL 99
SER 100
0.0362
SER 100
ASP 101
-0.0379
ASP 101
GLY 102
-0.0242
GLY 102
ASN 103
0.0165
ASN 103
GLY 104
0.0019
GLY 104
MET 105
0.0163
MET 105
ASN 106
0.0083
ASN 106
ALA 107
-0.1409
ALA 107
TRP 108
0.0352
TRP 108
VAL 109
-0.0329
VAL 109
ALA 110
0.0442
ALA 110
TRP 111
0.0051
TRP 111
ARG 112
0.0261
ARG 112
ASN 113
0.0176
ASN 113
ARG 114
0.0136
ARG 114
CYS 115
0.0094
CYS 115
LYS 116
0.0257
LYS 116
GLY 117
-0.0318
GLY 117
THR 118
-0.0214
THR 118
ASP 119
-0.0691
ASP 119
VAL 120
0.0270
VAL 120
GLN 121
-0.0675
GLN 121
ALA 122
0.0265
ALA 122
TRP 123
0.0123
TRP 123
ILE 124
-0.1021
ILE 124
ARG 125
0.0485
ARG 125
GLY 126
-0.4187
GLY 126
CYS 127
0.2979
CYS 127
ARG 128
-0.1157
ARG 128
LEU 129
-0.3330
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.