This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0380
VAL 2
PHE 3
0.1161
PHE 3
GLY 4
0.1209
GLY 4
ARG 5
0.1553
ARG 5
CYS 6
0.0367
CYS 6
GLU 7
0.0664
GLU 7
LEU 8
-0.0130
LEU 8
ALA 9
0.0922
ALA 9
ALA 10
-0.0324
ALA 10
ALA 11
-0.0211
ALA 11
MET 12
0.0296
MET 12
LYS 13
0.0033
LYS 13
ARG 14
0.0312
ARG 14
HIS 15
-0.1150
HIS 15
GLY 16
0.1624
GLY 16
LEU 17
0.0117
LEU 17
ASP 18
-0.0879
ASP 18
ASN 19
0.0230
ASN 19
TYR 20
-0.3013
TYR 20
ARG 21
0.0658
ARG 21
GLY 22
-0.2713
GLY 22
TYR 23
0.0391
TYR 23
SER 24
-0.2251
SER 24
LEU 25
0.0070
LEU 25
GLY 26
-0.0422
GLY 26
ASN 27
-0.0557
ASN 27
TRP 28
-0.0395
TRP 28
VAL 29
-0.0869
VAL 29
CYS 30
-0.0424
CYS 30
ALA 31
0.0154
ALA 31
ALA 32
-0.0412
ALA 32
LYS 33
-0.0299
LYS 33
PHE 34
-0.0635
PHE 34
GLU 35
0.2625
GLU 35
SER 36
-0.2447
SER 36
ASN 37
0.1346
ASN 37
PHE 38
-0.0497
PHE 38
ASN 39
0.4128
ASN 39
THR 40
0.0367
THR 40
GLN 41
-0.0270
GLN 41
ALA 42
-0.1246
ALA 42
THR 43
0.4125
THR 43
ASN 44
-0.1105
ASN 44
ARG 45
0.2792
ARG 45
ASN 46
0.0732
ASN 46
THR 47
0.2446
THR 47
ASP 48
-0.0322
ASP 48
GLY 49
0.0247
GLY 49
SER 50
-0.0081
SER 50
THR 51
0.0672
THR 51
ASP 52
0.1651
ASP 52
TYR 53
-0.1326
TYR 53
GLY 54
0.3256
GLY 54
ILE 55
0.1873
ILE 55
LEU 56
-0.1004
LEU 56
GLN 57
0.1649
GLN 57
ILE 58
0.0695
ILE 58
ASN 59
-0.1760
ASN 59
SER 60
-0.0381
SER 60
ARG 61
0.0723
ARG 61
TRP 62
-0.1013
TRP 62
TRP 63
0.0363
TRP 63
CYS 64
-0.4086
CYS 64
ASN 65
-0.2233
ASN 65
ASP 66
-0.1887
ASP 66
GLY 67
0.1772
GLY 67
ARG 68
-0.1493
ARG 68
THR 69
-0.0500
THR 69
PRO 70
0.1138
PRO 70
GLY 71
-0.0036
GLY 71
SER 72
0.2183
SER 72
ARG 73
-0.2117
ARG 73
ASN 74
0.3133
ASN 74
LEU 75
-0.3310
LEU 75
CYS 76
-0.0347
CYS 76
ASN 77
-0.2334
ASN 77
ILE 78
0.1355
ILE 78
PRO 79
-0.0970
PRO 79
CYS 80
-0.1045
CYS 80
SER 81
0.0228
SER 81
ALA 82
-0.1832
ALA 82
LEU 83
0.0022
LEU 83
LEU 84
0.0491
LEU 84
SER 85
-0.1793
SER 85
SER 86
0.2958
SER 86
ASP 87
-0.0679
ASP 87
ILE 88
-0.0100
ILE 88
THR 89
-0.0182
THR 89
ALA 90
-0.0981
ALA 90
SER 91
0.0080
SER 91
VAL 92
-0.0619
VAL 92
ASN 93
-0.0458
ASN 93
CYS 94
-0.1679
CYS 94
ALA 95
-0.1750
ALA 95
LYS 96
0.0537
LYS 96
LYS 97
-0.3396
LYS 97
ILE 98
0.0695
ILE 98
VAL 99
-0.4452
VAL 99
SER 100
0.0722
SER 100
ASP 101
-0.1955
ASP 101
GLY 102
-0.1615
GLY 102
ASN 103
-0.0280
ASN 103
GLY 104
0.0876
GLY 104
MET 105
-0.0452
MET 105
ASN 106
0.0485
ASN 106
ALA 107
-0.2027
ALA 107
TRP 108
-0.0182
TRP 108
VAL 109
0.0816
VAL 109
ALA 110
-0.0171
ALA 110
TRP 111
0.0271
TRP 111
ARG 112
-0.0100
ARG 112
ASN 113
-0.0069
ASN 113
ARG 114
0.0058
ARG 114
CYS 115
-0.0181
CYS 115
LYS 116
0.0059
LYS 116
GLY 117
-0.0609
GLY 117
THR 118
-0.0281
THR 118
ASP 119
0.0867
ASP 119
VAL 120
-0.0953
VAL 120
GLN 121
0.0670
GLN 121
ALA 122
-0.0532
ALA 122
TRP 123
0.0482
TRP 123
ILE 124
0.0645
ILE 124
ARG 125
-0.1246
ARG 125
GLY 126
0.1226
GLY 126
CYS 127
-0.0918
CYS 127
ARG 128
0.0757
ARG 128
LEU 129
-0.0477
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.