CNRS Nantes University US2B US2B
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***  1bkz_monomerB  ***

CA strain for 240416191010734120

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1ASN 2 -0.1326
ASN 2VAL 3 -0.0205
VAL 3PRO 4 -0.1148
PRO 4HIS 5 0.1138
HIS 5LYS 6 0.0363
LYS 6SER 7 0.1012
SER 7SER 8 0.2138
SER 8LEU 9 -0.1036
LEU 9PRO 10 0.0634
PRO 10GLU 11 0.0138
GLU 11GLY 12 -0.1329
GLY 12ILE 13 -0.1870
ILE 13ARG 14 -0.0368
ARG 14PRO 15 -0.1802
PRO 15GLY 16 -0.0527
GLY 16THR 17 -0.0501
THR 17VAL 18 0.2060
VAL 18LEU 19 -0.0185
LEU 19ARG 20 0.0863
ARG 20ILE 21 0.0481
ILE 21ARG 22 0.0146
ARG 22GLY 23 0.1222
GLY 23LEU 24 0.0750
LEU 24VAL 25 0.0141
VAL 25PRO 26 0.0585
PRO 26PRO 27 -0.0395
PRO 27ASN 28 0.0011
ASN 28ALA 29 -0.0290
ALA 29SER 30 -0.0123
SER 30ARG 31 -0.0460
ARG 31PHE 32 0.0102
PHE 32HIS 33 -0.0758
HIS 33VAL 34 -0.0294
VAL 34ASN 35 -0.0711
ASN 35LEU 36 -0.1151
LEU 36LEU 37 -0.0014
LEU 37CYS 38 -0.0925
CYS 38GLY 39 0.0161
GLY 39GLU 40 -0.0582
GLU 40GLU 41 -0.1000
GLU 41GLN 42 -0.1021
GLN 42GLY 43 0.2994
GLY 43SER 44 0.0823
SER 44ASP 45 0.0761
ASP 45ALA 46 -0.0553
ALA 46ALA 47 0.0133
ALA 47LEU 48 -0.0559
LEU 48HIS 49 -0.1080
HIS 49PHE 50 -0.1020
PHE 50ASN 51 -0.0088
ASN 51PRO 52 -0.0759
PRO 52ARG 53 0.0125
ARG 53LEU 54 -0.1115
LEU 54ASP 55 0.0107
ASP 55THR 56 -0.0314
THR 56SER 57 0.0321
SER 57GLU 58 -0.0120
GLU 58VAL 59 0.0114
VAL 59VAL 60 -0.0701
VAL 60PHE 61 -0.0605
PHE 61ASN 62 -0.0203
ASN 62SER 63 -0.0494
SER 63LYS 64 0.0665
LYS 64GLU 65 -0.0562
GLU 65GLN 66 0.0408
GLN 66GLY 67 -0.0404
GLY 67SER 68 0.0387
SER 68TRP 69 -0.0420
TRP 69GLY 70 0.0815
GLY 70ARG 71 0.1467
ARG 71GLU 72 -0.0658
GLU 72GLU 73 -0.0014
GLU 73ARG 74 -0.0095
ARG 74GLY 75 -0.0009
GLY 75PRO 76 -0.0004
PRO 76GLY 77 0.0376
GLY 77VAL 78 0.0317
VAL 78PRO 79 -0.0006
PRO 79PHE 80 0.1006
PHE 80GLN 81 0.0683
GLN 81ARG 82 0.0807
ARG 82GLY 83 -0.0212
GLY 83GLN 84 0.0221
GLN 84PRO 85 0.0491
PRO 85PHE 86 0.0802
PHE 86GLU 87 0.1681
GLU 87VAL 88 0.0208
VAL 88LEU 89 0.1083
LEU 89ILE 90 0.0382
ILE 90ILE 91 -0.0097
ILE 91ALA 92 0.0961
ALA 92SER 93 -0.0435
SER 93ASP 94 0.0261
ASP 94ASP 95 -0.0147
ASP 95GLY 96 -0.0034
GLY 96PHE 97 -0.0118
PHE 97LYS 98 0.0474
LYS 98ALA 99 0.0327
ALA 99VAL 100 0.0092
VAL 100VAL 101 0.1292
VAL 101GLY 102 -0.0571
GLY 102ASP 103 0.0135
ASP 103ALA 104 -0.0276
ALA 104GLN 105 0.0616
GLN 105TYR 106 0.0304
TYR 106HIS 107 0.0403
HIS 107HIS 108 0.0604
HIS 108PHE 109 0.0391
PHE 109ARG 110 0.0007
ARG 110HIS 111 -0.0213
HIS 111ARG 112 0.1560
ARG 112LEU 113 -0.1533
LEU 113PRO 114 -0.0259
PRO 114LEU 115 0.1766
LEU 115ALA 116 -0.0808
ALA 116ARG 117 -0.0143
ARG 117VAL 118 0.0322
VAL 118ARG 119 0.0243
ARG 119LEU 120 -0.0168
LEU 120VAL 121 0.0065
VAL 121GLU 122 0.0018
GLU 122VAL 123 -0.0956
VAL 123GLY 124 0.0097
GLY 124GLY 125 0.0208
GLY 125ASP 126 -0.1343
ASP 126VAL 127 0.1098
VAL 127GLN 128 -0.0697
GLN 128LEU 129 -0.0039
LEU 129ASP 130 0.0025
ASP 130SER 131 0.0588
SER 131VAL 132 0.0479
VAL 132ARG 133 -0.0221
ARG 133ILE 134 0.1112
ILE 134PHE 135 -0.0040

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.