This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLY 2
0.0670
GLY 2
PRO 3
0.1340
PRO 3
LYS 4
-0.0022
LYS 4
ARG 5
0.0399
ARG 5
ARG 6
-0.0256
ARG 6
GLN 7
0.0090
GLN 7
LEU 8
-0.0448
LEU 8
THR 9
0.0805
THR 9
PHE 10
0.0112
PHE 10
ARG 11
0.0163
ARG 11
GLU 12
0.0465
GLU 12
LYS 13
-0.0034
LYS 13
SER 14
-0.0091
SER 14
ARG 15
0.0680
ARG 15
ILE 16
0.0140
ILE 16
ILE 17
0.0079
ILE 17
GLN 18
0.0169
GLN 18
GLU 19
0.0245
GLU 19
VAL 20
-0.0044
VAL 20
GLU 21
-0.0064
GLU 21
GLU 22
0.0180
GLU 22
ASN 23
-0.0013
ASN 23
PRO 24
-0.0074
PRO 24
ASP 25
0.0109
ASP 25
LEU 26
-0.0106
LEU 26
ARG 27
0.0098
ARG 27
LYS 28
-0.0066
LYS 28
GLY 29
0.0198
GLY 29
GLU 30
-0.0015
GLU 30
ILE 31
0.0127
ILE 31
ALA 32
-0.0207
ALA 32
ARG 33
0.0009
ARG 33
ARG 34
0.0040
ARG 34
PHE 35
-0.0171
PHE 35
ASN 36
0.0245
ASN 36
ILE 37
-0.0057
ILE 37
PRO 38
0.0350
PRO 38
PRO 39
-0.0135
PRO 39
SER 40
0.0000
SER 40
THR 41
0.0043
THR 41
LEU 42
-0.0123
LEU 42
SER 43
0.0025
SER 43
THR 44
0.0053
THR 44
ILE 45
-0.0178
ILE 45
LEU 46
0.0036
LEU 46
LYS 47
0.0264
LYS 47
ASN 48
-0.0778
ASN 48
LYS 49
0.0743
LYS 49
ARG 50
-0.0183
ARG 50
ALA 51
0.0727
ALA 51
ILE 52
0.0302
ILE 52
LEU 53
0.0121
LEU 53
ALA 54
0.0490
ALA 54
SER 55
0.0341
SER 55
GLU 56
0.0497
GLU 56
ARG 57
0.0250
ARG 57
LYS 58
0.0326
LYS 58
TYR 59
0.0257
TYR 59
GLY 60
0.0364
GLY 60
VAL 61
0.0016
VAL 61
ALA 62
-0.0414
ALA 62
SER 63
0.0371
SER 63
THR 64
-0.0055
THR 64
CYS 65
-0.0616
CYS 65
ARG 66
-0.0151
ARG 66
LYS 67
0.0641
LYS 67
THR 68
0.0193
THR 68
ASN 69
0.0161
ASN 69
LYS 70
0.1038
LYS 70
LEU 71
-0.0100
LEU 71
SER 72
0.0306
SER 72
PRO 73
0.0373
PRO 73
TYR 74
-0.0895
TYR 74
ASP 75
0.0784
ASP 75
LYS 76
0.0088
LYS 76
LEU 77
0.0168
LEU 77
GLU 78
0.0364
GLU 78
GLY 79
-0.0026
GLY 79
LEU 80
-0.0054
LEU 80
LEU 81
0.0187
LEU 81
ILE 82
0.0345
ILE 82
ALA 83
0.0202
ALA 83
TRP 84
0.0350
TRP 84
PHE 85
-0.0065
PHE 85
GLN 86
0.0041
GLN 86
GLN 87
0.0275
GLN 87
ILE 88
0.0094
ILE 88
ARG 89
0.0071
ARG 89
ALA 90
0.0143
ALA 90
ALA 91
0.0019
ALA 91
GLY 92
-0.0009
GLY 92
LEU 93
0.0038
LEU 93
PRO 94
0.0073
PRO 94
VAL 95
-0.0034
VAL 95
LYS 96
0.0229
LYS 96
GLY 97
0.0126
GLY 97
ILE 98
-0.0094
ILE 98
ILE 99
0.0230
ILE 99
LEU 100
-0.0096
LEU 100
LYS 101
0.0057
LYS 101
GLU 102
-0.0065
GLU 102
LYS 103
0.0000
LYS 103
ALA 104
-0.0153
ALA 104
LEU 105
0.0054
LEU 105
ARG 106
-0.0121
ARG 106
ILE 107
0.0060
ILE 107
ALA 108
-0.0045
ALA 108
GLU 109
-0.0063
GLU 109
GLU 110
-0.0050
GLU 110
LEU 111
0.0053
LEU 111
GLY 112
0.0080
GLY 112
MET 113
-0.0085
MET 113
ASP 114
0.0161
ASP 114
ASP 115
-0.0230
ASP 115
PHE 116
0.0120
PHE 116
THR 117
0.0169
THR 117
ALA 118
-0.0005
ALA 118
SER 119
0.0007
SER 119
ASN 120
0.0010
ASN 120
GLY 121
-0.0022
GLY 121
TRP 122
-0.0054
TRP 122
LEU 123
-0.0113
LEU 123
ASP 124
0.0032
ASP 124
ARG 125
-0.0056
ARG 125
PHE 126
0.0244
PHE 126
ARG 127
-0.0114
ARG 127
ARG 128
-0.0206
ARG 128
ARG 129
-0.0677
ARG 129
ARG 130
0.0394
ARG 130
SER 131
0.0189
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.