This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
ASN 2
0.0049
ASN 2
VAL 3
0.0262
VAL 3
PRO 4
0.1706
PRO 4
HIS 5
-0.2396
HIS 5
LYS 6
-0.0195
LYS 6
SER 7
-0.0627
SER 7
SER 8
-0.0147
SER 8
LEU 9
-0.0228
LEU 9
PRO 10
0.0085
PRO 10
GLU 11
-0.0039
GLU 11
GLY 12
-0.0375
GLY 12
ILE 13
-0.0126
ILE 13
ARG 14
0.0012
ARG 14
PRO 15
-0.0102
PRO 15
GLY 16
-0.0137
GLY 16
THR 17
0.0007
THR 17
VAL 18
0.0045
VAL 18
LEU 19
-0.0088
LEU 19
ARG 20
0.0131
ARG 20
ILE 21
0.0038
ILE 21
ARG 22
0.0140
ARG 22
GLY 23
0.0018
GLY 23
LEU 24
0.0250
LEU 24
VAL 25
0.0322
VAL 25
PRO 26
0.0053
PRO 26
PRO 27
-0.0096
PRO 27
ASN 28
0.0026
ASN 28
ALA 29
-0.0020
ALA 29
SER 30
0.0139
SER 30
ARG 31
-0.0015
ARG 31
PHE 32
-0.0095
PHE 32
HIS 33
-0.0293
HIS 33
VAL 34
0.0193
VAL 34
ASN 35
0.0095
ASN 35
LEU 36
0.0265
LEU 36
LEU 37
0.0003
LEU 37
CYS 38
0.0234
CYS 38
GLY 39
0.0038
GLY 39
GLU 40
0.0175
GLU 40
GLU 41
0.0013
GLU 41
GLN 42
0.0224
GLN 42
GLY 43
-0.0093
GLY 43
SER 44
-0.0075
SER 44
ASP 45
-0.0060
ASP 45
ALA 46
-0.0040
ALA 46
ALA 47
0.0075
ALA 47
LEU 48
-0.0009
LEU 48
HIS 49
0.0047
HIS 49
PHE 50
-0.0054
PHE 50
ASN 51
-0.0252
ASN 51
PRO 52
0.0000
PRO 52
ARG 53
-0.0013
ARG 53
LEU 54
-0.0038
LEU 54
ASP 55
0.0034
ASP 55
THR 56
-0.0033
THR 56
SER 57
0.0077
SER 57
GLU 58
-0.0096
GLU 58
VAL 59
-0.0014
VAL 59
VAL 60
-0.0110
VAL 60
PHE 61
-0.0096
PHE 61
ASN 62
-0.0258
ASN 62
SER 63
-0.0178
SER 63
LYS 64
-0.0116
LYS 64
GLU 65
0.0003
GLU 65
GLN 66
-0.0044
GLN 66
GLY 67
0.0070
GLY 67
SER 68
0.0041
SER 68
TRP 69
-0.0049
TRP 69
GLY 70
0.0051
GLY 70
ARG 71
-0.0155
ARG 71
GLU 72
-0.0038
GLU 72
GLU 73
-0.0132
GLU 73
ARG 74
-0.0253
ARG 74
GLY 75
-0.0096
GLY 75
PRO 76
-0.0055
PRO 76
GLY 77
0.0013
GLY 77
VAL 78
-0.0172
VAL 78
PRO 79
0.0245
PRO 79
PHE 80
-0.0252
PHE 80
GLN 81
0.0054
GLN 81
ARG 82
-0.0087
ARG 82
GLY 83
0.0097
GLY 83
GLN 84
0.0094
GLN 84
PRO 85
0.0115
PRO 85
PHE 86
-0.0074
PHE 86
GLU 87
0.0191
GLU 87
VAL 88
0.0142
VAL 88
LEU 89
-0.0016
LEU 89
ILE 90
0.0064
ILE 90
ILE 91
-0.0018
ILE 91
ALA 92
0.0038
ALA 92
SER 93
-0.0072
SER 93
ASP 94
-0.0078
ASP 94
ASP 95
-0.0006
ASP 95
GLY 96
0.0009
GLY 96
PHE 97
0.0008
PHE 97
LYS 98
0.0030
LYS 98
ALA 99
0.0041
ALA 99
VAL 100
-0.0025
VAL 100
VAL 101
0.0024
VAL 101
GLY 102
-0.0032
GLY 102
ASP 103
-0.0246
ASP 103
ALA 104
0.0051
ALA 104
GLN 105
-0.0110
GLN 105
TYR 106
0.0105
TYR 106
HIS 107
-0.0193
HIS 107
HIS 108
-0.0052
HIS 108
PHE 109
-0.0064
PHE 109
ARG 110
0.0035
ARG 110
HIS 111
-0.0045
HIS 111
ARG 112
-0.0119
ARG 112
LEU 113
-0.0110
LEU 113
PRO 114
-0.0036
PRO 114
LEU 115
-0.0083
LEU 115
ALA 116
0.0074
ALA 116
ARG 117
0.0005
ARG 117
VAL 118
-0.0079
VAL 118
ARG 119
-0.0056
ARG 119
LEU 120
-0.0086
LEU 120
VAL 121
0.0052
VAL 121
GLU 122
0.0406
GLU 122
VAL 123
0.0220
VAL 123
GLY 124
0.0961
GLY 124
GLY 125
-0.0182
GLY 125
ASP 126
0.1236
ASP 126
VAL 127
0.0510
VAL 127
GLN 128
0.0161
GLN 128
LEU 129
0.0402
LEU 129
ASP 130
-0.0069
ASP 130
SER 131
0.0029
SER 131
VAL 132
0.0424
VAL 132
ARG 133
-0.0628
ARG 133
ILE 134
0.0263
ILE 134
PHE 135
-0.0054
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.