This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
-0.0006
LYS 2
ALA 3
0.0715
ALA 3
VAL 4
-0.0064
VAL 4
ILE 5
0.1407
ILE 5
ASN 6
0.0206
ASN 6
GLY 7
-0.0105
GLY 7
GLU 8
0.0125
GLU 8
GLN 9
-0.0619
GLN 9
ILE 10
-0.0906
ILE 10
ARG 11
0.1864
ARG 11
SER 12
0.1947
SER 12
ILE 13
-0.2525
ILE 13
SER 14
0.1867
SER 14
ASP 15
-0.3121
ASP 15
LEU 16
-0.1888
LEU 16
HIS 17
-0.1746
HIS 17
GLN 18
-0.0434
GLN 18
THR 19
-0.1013
THR 19
LEU 20
-0.1473
LEU 20
LYS 21
-0.2523
LYS 21
LYS 22
0.1368
LYS 22
GLU 23
0.0317
GLU 23
LEU 24
-0.1668
LEU 24
ALA 25
-0.0545
ALA 25
LEU 26
-0.0043
LEU 26
PRO 27
-0.1412
PRO 27
GLU 28
0.0167
GLU 28
TYR 29
0.1414
TYR 29
TYR 30
0.0202
TYR 30
GLY 31
-0.0308
GLY 31
GLU 32
0.0694
GLU 32
ASN 33
-0.0599
ASN 33
LEU 34
0.0544
LEU 34
ASP 35
0.1382
ASP 35
ALA 36
0.1742
ALA 36
LEU 37
0.0349
LEU 37
TRP 38
-0.1318
TRP 38
ASP 39
0.1355
ASP 39
CYS 40
-0.0354
CYS 40
LEU 41
0.0772
LEU 41
THR 42
-0.0442
THR 42
GLY 43
0.1676
GLY 43
TRP 44
0.0322
TRP 44
VAL 45
-0.0293
VAL 45
GLU 46
-0.0069
GLU 46
TYR 47
0.0189
TYR 47
PRO 48
0.0183
PRO 48
LEU 49
0.0684
LEU 49
VAL 50
0.0060
VAL 50
LEU 51
-0.0206
LEU 51
GLU 52
0.0870
GLU 52
TRP 53
-0.0938
TRP 53
ARG 54
0.1994
ARG 54
GLN 55
-0.1367
GLN 55
PHE 56
0.2900
PHE 56
GLU 57
-0.1639
GLU 57
GLN 58
0.0908
GLN 58
SER 59
-0.0218
SER 59
LYS 60
0.0103
LYS 60
GLN 61
-0.0343
GLN 61
LEU 62
0.1092
LEU 62
THR 63
0.0279
THR 63
GLU 64
0.1674
GLU 64
ASN 65
-0.1237
ASN 65
GLY 66
0.1026
GLY 66
ALA 67
-0.0707
ALA 67
GLU 68
-0.0377
GLU 68
SER 69
0.3078
SER 69
VAL 70
0.0237
VAL 70
LEU 71
0.0125
LEU 71
GLN 72
0.0822
GLN 72
VAL 73
0.1187
VAL 73
PHE 74
-0.0042
PHE 74
ARG 75
0.0140
ARG 75
GLU 76
0.1694
GLU 76
ALA 77
-0.0115
ALA 77
LYS 78
0.0365
LYS 78
ALA 79
0.0488
ALA 79
GLU 80
0.0607
GLU 80
GLY 81
-0.0536
GLY 81
CYS 82
0.0194
CYS 82
ASP 83
0.0083
ASP 83
ILE 84
-0.0061
ILE 84
THR 85
0.0567
THR 85
ILE 86
-0.1713
ILE 86
ILE 87
0.2659
ILE 87
LEU 88
-0.2359
LEU 88
SER 89
0.3984
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.