This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
0.0932
LYS 2
ALA 3
0.0348
ALA 3
VAL 4
0.2819
VAL 4
ILE 5
0.0879
ILE 5
ASN 6
0.0909
ASN 6
GLY 7
0.1496
GLY 7
GLU 8
-0.0446
GLU 8
GLN 9
0.0152
GLN 9
ILE 10
-0.1451
ILE 10
ARG 11
0.0969
ARG 11
SER 12
-0.0714
SER 12
ILE 13
-0.3094
ILE 13
SER 14
0.1199
SER 14
ASP 15
-0.1053
ASP 15
LEU 16
-0.1646
LEU 16
HIS 17
0.0400
HIS 17
GLN 18
-0.0552
GLN 18
THR 19
-0.0216
THR 19
LEU 20
0.1249
LEU 20
LYS 21
0.2680
LYS 21
LYS 22
-0.2761
LYS 22
GLU 23
0.3383
GLU 23
LEU 24
-0.1100
LEU 24
ALA 25
0.1787
ALA 25
LEU 26
0.2913
LEU 26
PRO 27
0.3449
PRO 27
GLU 28
0.2201
GLU 28
TYR 29
-0.2663
TYR 29
TYR 30
-0.0761
TYR 30
GLY 31
0.0519
GLY 31
GLU 32
-0.2135
GLU 32
ASN 33
-0.0315
ASN 33
LEU 34
-0.2865
LEU 34
ASP 35
0.0096
ASP 35
ALA 36
-0.3749
ALA 36
LEU 37
0.0116
LEU 37
TRP 38
-0.1453
TRP 38
ASP 39
-0.0664
ASP 39
CYS 40
-0.0099
CYS 40
LEU 41
-0.0092
LEU 41
THR 42
-0.0613
THR 42
GLY 43
0.1048
GLY 43
TRP 44
0.1070
TRP 44
VAL 45
0.1246
VAL 45
GLU 46
0.0749
GLU 46
TYR 47
0.1849
TYR 47
PRO 48
0.1518
PRO 48
LEU 49
0.1767
LEU 49
VAL 50
0.0275
VAL 50
LEU 51
-0.1380
LEU 51
GLU 52
0.0757
GLU 52
TRP 53
-0.0776
TRP 53
ARG 54
-0.0029
ARG 54
GLN 55
0.0939
GLN 55
PHE 56
-0.1923
PHE 56
GLU 57
-0.0033
GLU 57
GLN 58
-0.0470
GLN 58
SER 59
0.0321
SER 59
LYS 60
0.1123
LYS 60
GLN 61
-0.1569
GLN 61
LEU 62
0.1529
LEU 62
THR 63
-0.0635
THR 63
GLU 64
0.1652
GLU 64
ASN 65
-0.3162
ASN 65
GLY 66
0.0940
GLY 66
ALA 67
-0.0209
ALA 67
GLU 68
0.1165
GLU 68
SER 69
-0.0670
SER 69
VAL 70
-0.0061
VAL 70
LEU 71
-0.0872
LEU 71
GLN 72
0.1931
GLN 72
VAL 73
-0.0417
VAL 73
PHE 74
-0.0645
PHE 74
ARG 75
0.1469
ARG 75
GLU 76
0.1817
GLU 76
ALA 77
0.0104
ALA 77
LYS 78
0.0266
LYS 78
ALA 79
0.1509
ALA 79
GLU 80
0.0959
GLU 80
GLY 81
-0.0786
GLY 81
CYS 82
0.2047
CYS 82
ASP 83
-0.0590
ASP 83
ILE 84
-0.0676
ILE 84
THR 85
0.0705
THR 85
ILE 86
-0.3186
ILE 86
ILE 87
0.2052
ILE 87
LEU 88
-0.2561
LEU 88
SER 89
0.0983
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.