This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
LYS 2
-0.0578
LYS 2
ALA 3
0.0186
ALA 3
VAL 4
-0.1410
VAL 4
ILE 5
0.0920
ILE 5
ASN 6
-0.0343
ASN 6
GLY 7
-0.0042
GLY 7
GLU 8
0.0648
GLU 8
GLN 9
-0.2059
GLN 9
ILE 10
0.0223
ILE 10
ARG 11
0.1436
ARG 11
SER 12
-0.3762
SER 12
ILE 13
0.0316
ILE 13
SER 14
0.0117
SER 14
ASP 15
0.0121
ASP 15
LEU 16
0.2858
LEU 16
HIS 17
-0.3726
HIS 17
GLN 18
0.3251
GLN 18
THR 19
-0.0139
THR 19
LEU 20
-0.1398
LEU 20
LYS 21
-0.2105
LYS 21
LYS 22
0.2446
LYS 22
GLU 23
0.0692
GLU 23
LEU 24
-0.1685
LEU 24
ALA 25
0.1693
ALA 25
LEU 26
0.1678
LEU 26
PRO 27
0.1112
PRO 27
GLU 28
0.4018
GLU 28
TYR 29
-0.2852
TYR 29
TYR 30
-0.1247
TYR 30
GLY 31
0.1793
GLY 31
GLU 32
-0.2550
GLU 32
ASN 33
0.0988
ASN 33
LEU 34
-0.1488
LEU 34
ASP 35
0.0549
ASP 35
ALA 36
0.1429
ALA 36
LEU 37
0.0266
LEU 37
TRP 38
-0.0980
TRP 38
ASP 39
0.1235
ASP 39
CYS 40
-0.0406
CYS 40
LEU 41
0.2457
LEU 41
THR 42
-0.1485
THR 42
GLY 43
0.3308
GLY 43
TRP 44
0.0377
TRP 44
VAL 45
0.3408
VAL 45
GLU 46
-0.0042
GLU 46
TYR 47
0.1757
TYR 47
PRO 48
0.1702
PRO 48
LEU 49
0.0067
LEU 49
VAL 50
0.1019
VAL 50
LEU 51
0.0314
LEU 51
GLU 52
0.0131
GLU 52
TRP 53
0.0186
TRP 53
ARG 54
0.1038
ARG 54
GLN 55
0.0156
GLN 55
PHE 56
0.2367
PHE 56
GLU 57
0.0224
GLU 57
GLN 58
-0.0007
GLN 58
SER 59
-0.1687
SER 59
LYS 60
0.0179
LYS 60
GLN 61
0.0799
GLN 61
LEU 62
-0.3030
LEU 62
THR 63
0.0222
THR 63
GLU 64
-0.2057
GLU 64
ASN 65
0.0807
ASN 65
GLY 66
-0.0557
GLY 66
ALA 67
0.0120
ALA 67
GLU 68
-0.0559
GLU 68
SER 69
0.0489
SER 69
VAL 70
-0.0147
VAL 70
LEU 71
-0.1147
LEU 71
GLN 72
-0.0550
GLN 72
VAL 73
0.1359
VAL 73
PHE 74
-0.1335
PHE 74
ARG 75
-0.0012
ARG 75
GLU 76
0.0841
GLU 76
ALA 77
0.0220
ALA 77
LYS 78
-0.0114
LYS 78
ALA 79
-0.0292
ALA 79
GLU 80
0.0745
GLU 80
GLY 81
-0.0465
GLY 81
CYS 82
0.0018
CYS 82
ASP 83
-0.0724
ASP 83
ILE 84
0.0245
ILE 84
THR 85
0.0505
THR 85
ILE 86
0.0676
ILE 86
ILE 87
0.0495
ILE 87
LEU 88
0.0476
LEU 88
SER 89
0.2099
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.