CNRS Nantes University US2B US2B
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CA strain for 240227210821858768

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLU 338VAL 339 -0.0320
VAL 339ASN 340 0.0585
ASN 340LEU 341 -0.0235
LEU 341ASP 342 0.0241
ASP 342ARG 343 0.0526
ARG 343TYR 344 0.0115
TYR 344GLN 345 0.0004
GLN 345THR 346 0.0894
THR 346ALA 347 0.1281
ALA 347LEU 348 0.0058
LEU 348GLU 349 -0.0020
GLU 349GLU 350 0.1848
GLU 350VAL 351 0.0026
VAL 351LEU 352 0.0504
LEU 352SER 353 0.0752
SER 353TRP 354 0.2220
TRP 354LEU 355 0.0023
LEU 355LEU 356 -0.0084
LEU 356SER 357 0.1676
SER 357ALA 358 0.0978
ALA 358GLU 359 -0.0103
GLU 359ASP 360 0.0688
ASP 360THR 361 0.1806
THR 361LEU 362 -0.0595
LEU 362GLN 363 -0.0353
GLN 363ALA 364 0.1026
ALA 364GLN 365 0.0794
GLN 365GLY 366 -0.1019
GLY 366GLU 367 -0.1622
GLU 367ILE 368 -0.0373
ILE 368SER 369 0.1078
SER 369ASN 370 -0.0279
ASN 370ASP 371 0.0003
ASP 371VAL 372 -0.0102
VAL 372GLU 373 0.0017
GLU 373VAL 374 0.0402
VAL 374VAL 375 -0.0035
VAL 375LYS 376 -0.0083
LYS 376ASP 377 0.0369
ASP 377GLN 378 0.0730
GLN 378PHE 379 -0.0102
PHE 379HIS 380 0.0046
HIS 380THR 381 0.1734
THR 381HIS 382 -0.0306
HIS 382GLU 383 0.0203
GLU 383GLU 383 0.0073
GLU 383GLY 384 0.1151
GLY 384TYR 385 0.1334
TYR 385MET 386 -0.0078
MET 386MET 387 0.0683
MET 387ASP 388 0.2048
ASP 388LEU 389 -0.0352
LEU 389THR 390 0.0004
THR 390ALA 391 0.1240
ALA 391HIS 392 0.0106
HIS 392GLN 393 0.0007
GLN 393GLY 394 0.1081
GLY 394ARG 395 0.1233
ARG 395VAL 396 -0.0556
VAL 396GLY 397 0.0151
GLY 397ASN 398 0.1814
ASN 398ILE 399 -0.0347
ILE 399LEU 400 -0.0076
LEU 400GLN 401 0.1429
GLN 401LEU 402 0.0701
LEU 402GLY 403 -0.0012
GLY 403SER 404 0.0071
SER 404LYS 405 0.0555
LYS 405LEU 406 -0.0071
LEU 406ILE 407 0.0038
ILE 407GLY 408 0.0333
GLY 408THR 409 0.0264
THR 409GLY 410 -0.0302
GLY 410LYS 411 -0.0084
LYS 411LEU 412 -0.0024
LEU 412SER 413 -0.0130
SER 413GLU 414 0.0037
GLU 414ASP 415 0.0142
ASP 415GLU 416 0.0270
GLU 416GLU 417 -0.0070
GLU 417THR 418 -0.0003
THR 418GLU 419 0.0672
GLU 419VAL 420 -0.0169
VAL 420GLN 421 -0.0043
GLN 421GLU 422 0.0957
GLU 422GLN 423 0.0236
GLN 423MET 424 -0.0436
MET 424ASN 425 0.0737
ASN 425LEU 426 0.1433
LEU 426LEU 427 0.0094
LEU 427ASN 428 -0.0131
ASN 428SER 429 0.1681
SER 429ARG 430 0.0800
ARG 430TRP 431 -0.1282
TRP 431GLU 432 0.0359
GLU 432CYS 433 0.1190
CYS 433LEU 434 0.0637
LEU 434ARG 435 -0.0278
ARG 435VAL 436 0.1001
VAL 436ALA 437 0.1621
ALA 437SER 438 -0.0293
SER 438MET 439 -0.0069
MET 439GLU 440 0.1531
GLU 440LYS 441 0.0867
LYS 441GLN 442 0.0089
GLN 442SER 443 0.0672
SER 443ASN 444 0.0648
ASN 444LEU 445 0.0028
LEU 445HIS 446 -0.0188
HIS 446ARG 447 0.0892
ARG 447VAL 448 -0.0007
VAL 448LEU 449 -0.0045
LEU 449MET 450 0.0147
MET 450ASP 451 0.0177
ASP 451LEU 452 -0.0103
LEU 452GLN 453 0.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.