This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
-0.1125
VAL 339
ASN 340
0.1571
ASN 340
LEU 341
-0.1046
LEU 341
ASP 342
0.0976
ASP 342
ARG 343
0.0924
ARG 343
TYR 344
0.1100
TYR 344
GLN 345
-0.0557
GLN 345
THR 346
0.2480
THR 346
ALA 347
0.1157
ALA 347
LEU 348
0.0233
LEU 348
GLU 349
-0.0188
GLU 349
GLU 350
0.1643
GLU 350
VAL 351
-0.0165
VAL 351
LEU 352
-0.0307
LEU 352
SER 353
0.1116
SER 353
TRP 354
-0.1694
TRP 354
LEU 355
0.0009
LEU 355
LEU 356
0.0241
LEU 356
SER 357
-0.0354
SER 357
ALA 358
-0.1138
ALA 358
GLU 359
-0.0073
GLU 359
ASP 360
-0.0640
ASP 360
THR 361
-0.1716
THR 361
LEU 362
0.0195
LEU 362
GLN 363
-0.0086
GLN 363
ALA 364
-0.2447
ALA 364
GLN 365
0.0218
GLN 365
GLY 366
0.0870
GLY 366
GLU 367
0.5234
GLU 367
ILE 368
0.1547
ILE 368
SER 369
0.0162
SER 369
ASN 370
0.1118
ASN 370
ASP 371
-0.0019
ASP 371
VAL 372
-0.0039
VAL 372
GLU 373
0.0024
GLU 373
VAL 374
-0.0308
VAL 374
VAL 375
-0.0151
VAL 375
LYS 376
-0.0098
LYS 376
ASP 377
-0.0639
ASP 377
GLN 378
-0.1313
GLN 378
PHE 379
0.0527
PHE 379
HIS 380
0.0307
HIS 380
THR 381
-0.3311
THR 381
HIS 382
0.0387
HIS 382
GLU 383
0.0117
GLU 383
GLU 383
-0.0031
GLU 383
GLY 384
-0.2293
GLY 384
TYR 385
-0.2097
TYR 385
MET 386
0.0700
MET 386
MET 387
-0.0034
MET 387
ASP 388
-0.2320
ASP 388
LEU 389
-0.0188
LEU 389
THR 390
0.0395
THR 390
ALA 391
0.0017
ALA 391
HIS 392
-0.0254
HIS 392
GLN 393
-0.0214
GLN 393
GLY 394
0.1482
GLY 394
ARG 395
0.1345
ARG 395
VAL 396
-0.1280
VAL 396
GLY 397
0.1117
GLY 397
ASN 398
0.2940
ASN 398
ILE 399
-0.1340
ILE 399
LEU 400
-0.0532
LEU 400
GLN 401
0.3158
GLN 401
LEU 402
0.1411
LEU 402
GLY 403
-0.0265
GLY 403
SER 404
-0.0182
SER 404
LYS 405
0.1304
LYS 405
LEU 406
-0.0367
LEU 406
ILE 407
-0.0292
ILE 407
GLY 408
0.0605
GLY 408
THR 409
0.0329
THR 409
GLY 410
-0.0343
GLY 410
LYS 411
-0.0340
LYS 411
LEU 412
-0.1115
LEU 412
SER 413
0.0153
SER 413
GLU 414
-0.0001
GLU 414
ASP 415
0.0482
ASP 415
GLU 416
0.0874
GLU 416
GLU 417
-0.0205
GLU 417
THR 418
-0.0029
THR 418
GLU 419
0.1942
GLU 419
VAL 420
-0.0133
VAL 420
GLN 421
-0.0176
GLN 421
GLU 422
0.1814
GLU 422
GLN 423
0.0619
GLN 423
MET 424
-0.0798
MET 424
ASN 425
0.1936
ASN 425
LEU 426
0.1924
LEU 426
LEU 427
0.0069
LEU 427
ASN 428
0.0144
ASN 428
SER 429
0.2807
SER 429
ARG 430
-0.0031
ARG 430
TRP 431
-0.1424
TRP 431
GLU 432
0.0967
GLU 432
CYS 433
-0.0004
CYS 433
LEU 434
-0.1237
LEU 434
ARG 435
-0.0729
ARG 435
VAL 436
0.0893
VAL 436
ALA 437
-0.2117
ALA 437
SER 438
-0.0172
SER 438
MET 439
-0.0098
MET 439
GLU 440
-0.1222
GLU 440
LYS 441
-0.2058
LYS 441
GLN 442
-0.0631
GLN 442
SER 443
-0.0830
SER 443
ASN 444
-0.1827
ASN 444
LEU 445
-0.0066
LEU 445
HIS 446
0.0958
HIS 446
ARG 447
-0.2145
ARG 447
VAL 448
-0.0702
VAL 448
LEU 449
0.0257
LEU 449
MET 450
0.0116
MET 450
ASP 451
-0.1039
ASP 451
LEU 452
0.0222
LEU 452
GLN 453
0.0123
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.