This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
0.0121
VAL 339
ASN 340
-0.0217
ASN 340
LEU 341
0.0222
LEU 341
ASP 342
-0.0106
ASP 342
ARG 343
0.0144
ARG 343
TYR 344
0.0272
TYR 344
GLN 345
-0.0330
GLN 345
THR 346
-0.0318
THR 346
ALA 347
-0.1296
ALA 347
LEU 348
0.0332
LEU 348
GLU 349
0.0737
GLU 349
GLU 350
-0.1569
GLU 350
VAL 351
-0.0336
VAL 351
LEU 352
0.0273
LEU 352
SER 353
0.0187
SER 353
TRP 354
-0.1729
TRP 354
LEU 355
0.0173
LEU 355
LEU 356
0.0925
LEU 356
SER 357
0.0030
SER 357
ALA 358
-0.1005
ALA 358
GLU 359
0.0343
GLU 359
ASP 360
-0.0331
ASP 360
THR 361
0.0699
THR 361
LEU 362
-0.1302
LEU 362
GLN 363
-0.1650
GLN 363
ALA 364
-0.1381
ALA 364
GLN 365
0.3043
GLN 365
GLY 366
-0.3841
GLY 366
GLU 367
0.2043
GLU 367
ILE 368
0.0944
ILE 368
SER 369
0.1503
SER 369
ASN 370
0.0909
ASN 370
ASP 371
-0.0184
ASP 371
VAL 372
-0.0527
VAL 372
GLU 373
-0.0402
GLU 373
VAL 374
0.0491
VAL 374
VAL 375
-0.0682
VAL 375
LYS 376
-0.0535
LYS 376
ASP 377
0.1022
ASP 377
GLN 378
0.0234
GLN 378
PHE 379
-0.0381
PHE 379
HIS 380
0.0102
HIS 380
THR 381
0.1130
THR 381
HIS 382
-0.0137
HIS 382
GLU 383
-0.0542
GLU 383
GLU 383
0.0070
GLU 383
GLY 384
0.0831
GLY 384
TYR 385
-0.2046
TYR 385
MET 386
0.0127
MET 386
MET 387
0.1132
MET 387
ASP 388
-0.1684
ASP 388
LEU 389
-0.0109
LEU 389
THR 390
-0.0189
THR 390
ALA 391
-0.1026
ALA 391
HIS 392
-0.0602
HIS 392
GLN 393
-0.0491
GLN 393
GLY 394
-0.0071
GLY 394
ARG 395
-0.1196
ARG 395
VAL 396
-0.0533
VAL 396
GLY 397
0.1132
GLY 397
ASN 398
-0.1927
ASN 398
ILE 399
-0.0309
ILE 399
LEU 400
-0.0387
LEU 400
GLN 401
-0.0581
GLN 401
LEU 402
-0.0750
LEU 402
GLY 403
-0.0761
GLY 403
SER 404
-0.1314
SER 404
LYS 405
0.0204
LYS 405
LEU 406
-0.0384
LEU 406
ILE 407
-0.1565
ILE 407
GLY 408
-0.0614
GLY 408
THR 409
-0.0036
THR 409
GLY 410
0.0331
GLY 410
LYS 411
-0.0856
LYS 411
LEU 412
-0.1404
LEU 412
SER 413
0.1231
SER 413
GLU 414
-0.0413
GLU 414
ASP 415
-0.0466
ASP 415
GLU 416
0.0084
GLU 416
GLU 417
0.0359
GLU 417
THR 418
-0.0623
THR 418
GLU 419
-0.0085
GLU 419
VAL 420
0.0387
VAL 420
GLN 421
0.0085
GLN 421
GLU 422
-0.1136
GLU 422
GLN 423
0.0466
GLN 423
MET 424
0.0203
MET 424
ASN 425
-0.1279
ASN 425
LEU 426
0.0593
LEU 426
LEU 427
-0.0499
LEU 427
ASN 428
-0.0505
ASN 428
SER 429
-0.0556
SER 429
ARG 430
0.1138
ARG 430
TRP 431
-0.1113
TRP 431
GLU 432
-0.0891
GLU 432
CYS 433
0.0785
CYS 433
LEU 434
0.0865
LEU 434
ARG 435
-0.0777
ARG 435
VAL 436
0.0175
VAL 436
ALA 437
0.1421
ALA 437
SER 438
0.0038
SER 438
MET 439
-0.0534
MET 439
GLU 440
0.1351
GLU 440
LYS 441
0.0657
LYS 441
GLN 442
0.0738
GLN 442
SER 443
0.1049
SER 443
ASN 444
0.0640
ASN 444
LEU 445
-0.0142
LEU 445
HIS 446
0.1377
HIS 446
ARG 447
0.1634
ARG 447
VAL 448
-0.0679
VAL 448
LEU 449
0.0319
LEU 449
MET 450
0.1426
MET 450
ASP 451
-0.0805
ASP 451
LEU 452
-0.0513
LEU 452
GLN 453
0.0638
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.