This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
0.0115
VAL 339
ASN 340
-0.0260
ASN 340
LEU 341
0.0154
LEU 341
ASP 342
-0.0231
ASP 342
ARG 343
-0.0116
ARG 343
TYR 344
-0.0044
TYR 344
GLN 345
0.0215
GLN 345
THR 346
-0.0507
THR 346
ALA 347
-0.0331
ALA 347
LEU 348
0.0074
LEU 348
GLU 349
-0.0078
GLU 349
GLU 350
-0.0394
GLU 350
VAL 351
0.0139
VAL 351
LEU 352
-0.0066
LEU 352
SER 353
-0.0213
SER 353
TRP 354
0.0167
TRP 354
LEU 355
0.0086
LEU 355
LEU 356
-0.0384
LEU 356
SER 357
0.0103
SER 357
ALA 358
0.0137
ALA 358
GLU 359
0.0026
GLU 359
ASP 360
-0.0600
ASP 360
THR 361
0.0811
THR 361
LEU 362
-0.0701
LEU 362
GLN 363
-0.0922
GLN 363
ALA 364
-0.0680
ALA 364
GLN 365
0.1227
GLN 365
GLY 366
-0.0880
GLY 366
GLU 367
0.1216
GLU 367
ILE 368
0.0154
ILE 368
SER 369
0.0767
SER 369
ASN 370
0.0129
ASN 370
ASP 371
0.0050
ASP 371
VAL 372
-0.0093
VAL 372
GLU 373
0.0078
GLU 373
VAL 374
0.0286
VAL 374
VAL 375
-0.0034
VAL 375
LYS 376
-0.0131
LYS 376
ASP 377
0.0145
ASP 377
GLN 378
0.0554
GLN 378
PHE 379
0.0138
PHE 379
HSD 380
0.0408
HSD 380
THR 381
0.0597
THR 381
HSD 382
0.0491
HSD 382
GLU 383
0.0804
GLU 383
GLY 384
-0.0225
GLY 384
TYR 385
0.1035
TYR 385
MET 386
0.0544
MET 386
MET 387
0.1134
MET 387
ASP 388
-0.0257
ASP 388
LEU 389
0.1048
LEU 389
THR 390
0.1114
THR 390
ALA 391
0.0109
ALA 391
HSD 392
0.0491
HSD 392
GLN 393
0.1382
GLN 393
GLY 394
-0.0061
GLY 394
ARG 395
0.0136
ARG 395
VAL 396
0.0485
VAL 396
GLY 397
0.0062
GLY 397
ASN 398
0.0330
ASN 398
ILE 399
0.0404
ILE 399
LEU 400
0.0461
LEU 400
GLN 401
0.0387
GLN 401
LEU 402
0.0216
LEU 402
GLY 403
0.0032
GLY 403
SER 404
0.0219
SER 404
LYS 405
0.0200
LYS 405
LEU 406
0.0047
LEU 406
ILE 407
0.0168
ILE 407
GLY 408
0.0307
GLY 408
THR 409
0.0173
THR 409
GLY 410
-0.0258
GLY 410
LYS 411
0.0062
LYS 411
LEU 412
0.0511
LEU 412
SER 413
-0.0519
SER 413
GLU 414
-0.0029
GLU 414
LEU 415
0.0051
LEU 415
GLU 416
-0.0313
GLU 416
GLU 417
-0.0027
GLU 417
THR 418
0.0033
THR 418
GLU 419
-0.0485
GLU 419
VAL 420
-0.0265
VAL 420
GLN 421
-0.0006
GLN 421
GLU 422
0.0174
GLU 422
GLN 423
-0.0493
GLN 423
MET 424
0.0158
MET 424
ASN 425
-0.0118
ASN 425
LEU 426
-0.0437
LEU 426
LEU 427
-0.0717
LEU 427
ASN 428
-0.0041
ASN 428
SER 429
-0.0685
SER 429
ARG 430
-0.0334
ARG 430
TRP 431
-0.0395
TRP 431
GLU 432
-0.0031
GLU 432
CYS 433
-0.1127
CYS 433
LEU 434
0.0230
LEU 434
ARG 435
-0.0744
ARG 435
VAL 436
-0.0214
VAL 436
ALA 437
-0.0395
ALA 437
SER 438
-0.0169
SER 438
MET 439
-0.0279
MET 439
GLU 440
-0.0329
GLU 440
LYS 441
0.0072
LYS 441
GLN 442
-0.0040
GLN 442
SER 443
-0.0391
SER 443
ASN 444
-0.0289
ASN 444
LEU 445
0.0142
LEU 445
HSD 446
0.0272
HSD 446
ARG 447
-0.0365
ARG 447
VAL 448
-0.0062
VAL 448
LEU 449
0.0090
LEU 449
MET 450
0.0073
MET 450
ASP 451
-0.0174
ASP 451
LEU 452
0.0028
LEU 452
GLN 453
-0.0059
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.