This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
-0.0070
VAL 339
ASN 340
0.0184
ASN 340
LEU 341
-0.0018
LEU 341
ASP 342
-0.0090
ASP 342
ARG 343
0.0270
ARG 343
TYR 344
0.0227
TYR 344
GLN 345
-0.0074
GLN 345
THR 346
-0.0164
THR 346
ALA 347
0.0106
ALA 347
LEU 348
0.0329
LEU 348
GLU 349
0.0332
GLU 349
GLU 350
-0.0203
GLU 350
VAL 351
0.0238
VAL 351
LEU 352
0.0339
LEU 352
SER 353
0.0075
SER 353
TRP 354
-0.0270
TRP 354
LEU 355
0.0635
LEU 355
LEU 356
0.0742
LEU 356
SER 357
0.0261
SER 357
ALA 358
-0.0061
ALA 358
GLU 359
0.0467
GLU 359
ASP 360
0.0813
ASP 360
THR 361
-0.0276
THR 361
LEU 362
0.0183
LEU 362
GLN 363
0.0637
GLN 363
ALA 364
0.1046
ALA 364
GLN 365
-0.1248
GLN 365
GLY 366
0.1257
GLY 366
GLU 367
-0.1601
GLU 367
ILE 368
-0.0596
ILE 368
SER 369
0.0037
SER 369
ASN 370
-0.0241
ASN 370
ASP 371
-0.0004
ASP 371
VAL 372
0.0048
VAL 372
GLU 373
0.0154
GLU 373
VAL 374
-0.0061
VAL 374
VAL 375
0.0272
VAL 375
LYS 376
0.0041
LYS 376
ASP 377
-0.0202
ASP 377
GLN 378
0.0020
GLN 378
PHE 379
-0.0011
PHE 379
HSD 380
0.0089
HSD 380
THR 381
-0.0479
THR 381
HSD 382
0.0390
HSD 382
GLU 383
0.0144
GLU 383
GLY 384
-0.0682
GLY 384
TYR 385
0.0689
TYR 385
MET 386
0.0238
MET 386
MET 387
-0.0713
MET 387
ASP 388
-0.0053
ASP 388
LEU 389
0.0202
LEU 389
THR 390
-0.0429
THR 390
ALA 391
0.0025
ALA 391
HSD 392
0.0214
HSD 392
GLN 393
-0.0143
GLN 393
GLY 394
0.0156
GLY 394
ARG 395
0.0083
ARG 395
VAL 396
-0.0365
VAL 396
GLY 397
0.0076
GLY 397
ASN 398
0.0092
ASN 398
ILE 399
-0.0099
ILE 399
LEU 400
-0.0149
LEU 400
GLN 401
0.0047
GLN 401
LEU 402
0.0119
LEU 402
GLY 403
-0.0146
GLY 403
SER 404
-0.0503
SER 404
LYS 405
0.0164
LYS 405
LEU 406
-0.0080
LEU 406
ILE 407
-0.0360
ILE 407
GLY 408
-0.0164
GLY 408
THR 409
0.0066
THR 409
GLY 410
0.0032
GLY 410
LYS 411
-0.0268
LYS 411
LEU 412
-0.0203
LEU 412
SER 413
0.0370
SER 413
GLU 414
-0.0081
GLU 414
LEU 415
-0.0091
LEU 415
GLU 416
-0.0209
GLU 416
GLU 417
0.0061
GLU 417
THR 418
-0.0145
THR 418
GLU 419
-0.0218
GLU 419
VAL 420
0.0111
VAL 420
GLN 421
0.0021
GLN 421
GLU 422
-0.0559
GLU 422
GLN 423
0.0007
GLN 423
MET 424
0.0216
MET 424
ASN 425
-0.0462
ASN 425
LEU 426
-0.0426
LEU 426
LEU 427
-0.0335
LEU 427
ASN 428
0.0017
ASN 428
SER 429
-0.0675
SER 429
ARG 430
0.0117
ARG 430
TRP 431
-0.0555
TRP 431
GLU 432
-0.0092
GLU 432
CYS 433
-0.0727
CYS 433
LEU 434
0.0005
LEU 434
ARG 435
-0.0771
ARG 435
VAL 436
-0.0328
VAL 436
ALA 437
-0.0002
ALA 437
SER 438
-0.0256
SER 438
MET 439
-0.0627
MET 439
GLU 440
-0.0183
GLU 440
LYS 441
0.0291
LYS 441
GLN 442
-0.0495
GLN 442
SER 443
-0.0545
SER 443
ASN 444
0.0047
ASN 444
LEU 445
0.0236
LEU 445
HSD 446
-0.0757
HSD 446
ARG 447
-0.0499
ARG 447
VAL 448
0.0170
VAL 448
LEU 449
-0.0070
LEU 449
MET 450
-0.0423
MET 450
ASP 451
0.0140
ASP 451
LEU 452
0.0125
LEU 452
GLN 453
-0.0106
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.