This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 338
VAL 339
0.0930
VAL 339
ASN 340
-0.1553
ASN 340
LEU 341
0.0450
LEU 341
ASP 342
-0.1110
ASP 342
ARG 343
-0.1090
ARG 343
TYR 344
-0.0996
TYR 344
GLN 345
0.0384
GLN 345
THR 346
-0.2691
THR 346
ALA 347
-0.1045
ALA 347
LEU 348
-0.0412
LEU 348
GLU 349
-0.0130
GLU 349
GLU 350
-0.1661
GLU 350
VAL 351
0.0256
VAL 351
LEU 352
-0.0132
LEU 352
SER 353
-0.1388
SER 353
TRP 354
0.1569
TRP 354
LEU 355
-0.0222
LEU 355
LEU 356
-0.0515
LEU 356
SER 357
-0.0151
SER 357
ALA 358
0.1187
ALA 358
GLU 359
-0.0065
GLU 359
ASP 360
0.0144
ASP 360
THR 361
0.1654
THR 361
LEU 362
-0.0197
LEU 362
GLN 363
-0.0048
GLN 363
ALA 364
0.2285
ALA 364
GLN 365
-0.0288
GLN 365
GLY 366
0.0121
GLY 366
GLU 367
-0.5980
GLU 367
ILE 368
-0.2165
ILE 368
SER 369
0.0326
SER 369
ASN 370
-0.1058
ASN 370
ASP 371
0.0047
ASP 371
VAL 372
0.0039
VAL 372
GLU 373
0.0103
GLU 373
VAL 374
0.0340
VAL 374
VAL 375
0.0247
VAL 375
LYS 376
0.0136
LYS 376
ASP 377
0.0353
ASP 377
GLN 378
0.1631
GLN 378
PHE 379
-0.0121
PHE 379
HSD 380
-0.0756
HSD 380
THR 381
0.4059
THR 381
HSD 382
-0.1069
HSD 382
GLU 383
-0.0257
GLU 383
GLY 384
0.2999
GLY 384
TYR 385
0.2082
TYR 385
MET 386
-0.0482
MET 386
MET 387
0.0888
MET 387
ASP 388
0.1719
ASP 388
LEU 389
-0.0094
LEU 389
THR 390
-0.0397
THR 390
ALA 391
0.0199
ALA 391
HSD 392
0.0045
HSD 392
GLN 393
0.0070
GLN 393
GLY 394
-0.1190
GLY 394
ARG 395
-0.1324
ARG 395
VAL 396
0.1319
VAL 396
GLY 397
-0.1225
GLY 397
ASN 398
-0.2506
ASN 398
ILE 399
0.1082
ILE 399
LEU 400
0.0396
LEU 400
GLN 401
-0.2918
GLN 401
LEU 402
-0.1391
LEU 402
GLY 403
0.0482
GLY 403
SER 404
0.0340
SER 404
LYS 405
-0.1389
LYS 405
LEU 406
0.0368
LEU 406
ILE 407
0.0786
ILE 407
GLY 408
-0.0508
GLY 408
THR 409
-0.0511
THR 409
GLY 410
0.0744
GLY 410
LYS 411
0.0560
LYS 411
LEU 412
0.1197
LEU 412
SER 413
-0.0360
SER 413
GLU 414
-0.0054
GLU 414
LEU 415
0.0049
LEU 415
GLU 416
-0.1459
GLU 416
GLU 417
-0.0011
GLU 417
THR 418
-0.0009
THR 418
GLU 419
-0.2166
GLU 419
VAL 420
0.0072
VAL 420
GLN 421
-0.0118
GLN 421
GLU 422
-0.2006
GLU 422
GLN 423
-0.0599
GLN 423
MET 424
0.0754
MET 424
ASN 425
-0.1896
ASN 425
LEU 426
-0.2263
LEU 426
LEU 427
-0.0054
LEU 427
ASN 428
-0.0018
ASN 428
SER 429
-0.2836
SER 429
ARG 430
-0.0356
ARG 430
TRP 431
0.1446
TRP 431
GLU 432
-0.0789
GLU 432
CYS 433
-0.0345
CYS 433
LEU 434
0.0829
LEU 434
ARG 435
0.0458
ARG 435
VAL 436
-0.0852
VAL 436
ALA 437
0.1493
ALA 437
SER 438
-0.0189
SER 438
MET 439
-0.0146
MET 439
GLU 440
0.0881
GLU 440
LYS 441
0.1923
LYS 441
GLN 442
0.0338
GLN 442
SER 443
0.1401
SER 443
ASN 444
0.1520
ASN 444
LEU 445
-0.0199
LEU 445
HSD 446
-0.0770
HSD 446
ARG 447
0.1549
ARG 447
VAL 448
0.0570
VAL 448
LEU 449
-0.0483
LEU 449
MET 450
-0.0006
MET 450
ASP 451
0.0646
ASP 451
LEU 452
-0.0203
LEU 452
GLN 453
0.0534
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.