CNRS Nantes University US2B US2B
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***  4JBU_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220091929168908

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1HIS 2 -0.0001
HIS 2MET 3 0.0178
MET 3GLY 4 -0.0001
GLY 4SER 5 -0.0922
SER 5SER 6 -0.0002
SER 6VAL 7 -0.0705
VAL 7LEU 8 0.0000
LEU 8GLU 9 0.0548
GLU 9GLU 10 -0.0001
GLU 10LEU 11 -0.0273
LEU 11VAL 12 0.0004
VAL 12GLN 13 -0.0091
GLN 13LEU 14 -0.0003
LEU 14VAL 15 0.0622
VAL 15LYS 16 -0.0000
LYS 16ASP 17 -0.0059
ASP 17LYS 18 0.0000
LYS 18ASN 19 0.0810
ASN 19ILE 20 0.0002
ILE 20ASP 21 0.1248
ASP 21ILE 22 0.0002
ILE 22SER 23 0.1479
SER 23ILE 24 0.0000
ILE 24LYS 25 0.0632
LYS 25TYR 26 -0.0001
TYR 26ASP 27 -0.0018
ASP 27PRO 28 0.0000
PRO 28ARG 29 -0.0082
ARG 29LYS 30 -0.0000
LYS 30ASP 31 -0.0648
ASP 31SER 32 -0.0003
SER 32GLU 33 -0.0081
GLU 33VAL 34 -0.0001
VAL 34PHE 35 0.0508
PHE 35ALA 36 0.0000
ALA 36ASN 37 0.1051
ASN 37ARG 38 0.0002
ARG 38VAL 39 0.1428
VAL 39ILE 40 -0.0001
ILE 40THR 41 0.0536
THR 41ASP 42 -0.0001
ASP 42ASP 43 -0.0301
ASP 43ILE 44 0.0001
ILE 44GLU 45 0.0007
GLU 45LEU 46 -0.0001
LEU 46LEU 47 0.0097
LEU 47LYS 48 0.0001
LYS 48LYS 49 0.0112
LYS 49ILE 50 0.0000
ILE 50LEU 51 -0.0119
LEU 51ALA 52 0.0004
ALA 52TYR 53 0.0154
TYR 53PHE 54 0.0001
PHE 54LEU 55 -0.0091
LEU 55PRO 56 0.0003
PRO 56GLU 57 0.1331
GLU 57ASP 58 0.0005
ASP 58ALA 59 -0.0135
ALA 59ILE 60 -0.0000
ILE 60LEU 61 -0.1046
LEU 61LYS 62 0.0002
LYS 62GLY 63 -0.0906
GLY 63GLY 64 -0.0003
GLY 64HIS 65 -0.1601
HIS 65TYR 66 -0.0002
TYR 66ASP 67 -0.0069
ASP 67ASN 68 -0.0003
ASN 68GLN 69 -0.1034
GLN 69LEU 70 0.0000
LEU 70GLN 71 -0.0355
GLN 71ASN 72 0.0001
ASN 72GLY 73 -0.0756
GLY 73ILE 74 0.0001
ILE 74LYS 75 -0.1136
LYS 75ARG 76 0.0002
ARG 76VAL 77 -0.0056
VAL 77LYS 78 -0.0002
LYS 78GLU 79 -0.0638
GLU 79PHE 80 0.0002
PHE 80LEU 81 -0.0182
LEU 81GLU 82 -0.0000
GLU 82SER 83 -0.0374
SER 83SER 84 -0.0001
SER 84PRO 85 0.0001
PRO 85ASN 86 0.0001
ASN 86THR 87 -0.0465
THR 87GLN 88 0.0001
GLN 88TRP 89 -0.0191
TRP 89GLU 90 0.0002
GLU 90LEU 91 0.0142
LEU 91ARG 92 0.0004
ARG 92ALA 93 -0.0156
ALA 93PHE 94 0.0002
PHE 94MET 95 -0.0190
MET 95ALA 96 0.0004
ALA 96VAL 97 0.0134
VAL 97MET 98 0.0003
MET 98HIS 99 -0.0430
HIS 99PHE 100 0.0001
PHE 100SER 101 -0.0151
SER 101LEU 102 -0.0002
LEU 102THR 103 -0.0403
THR 103ALA 104 -0.0001
ALA 104ASP 105 -0.1224
ASP 105ARG 106 0.0004
ARG 106ILE 107 0.0219
ILE 107ASP 108 -0.0002
ASP 108ASP 109 -0.0124
ASP 109ASP 110 -0.0001
ASP 110ILE 111 0.0459
ILE 111LEU 112 0.0000
LEU 112LYS 113 0.0288
LYS 113VAL 114 0.0001
VAL 114ILE 115 0.0007
ILE 115VAL 116 -0.0005
VAL 116ASP 117 0.0371
ASP 117SER 118 -0.0001
SER 118MET 119 -0.0148
MET 119ASN 120 0.0005
ASN 120HIS 121 0.0417
HIS 121HIS 122 0.0000
HIS 122GLY 123 0.0222
GLY 123ASP 124 0.0001
ASP 124ALA 125 -0.0154
ALA 125ARG 126 -0.0003
ARG 126SER 127 0.0448
SER 127LYS 128 0.0003
LYS 128LEU 129 0.0337
LEU 129ARG 130 0.0002
ARG 130GLU 131 -0.0523
GLU 131GLU 132 0.0003
GLU 132LEU 133 0.0816
LEU 133ALA 134 -0.0002
ALA 134GLU 135 -0.0434
GLU 135LEU 136 0.0002
LEU 136THR 137 0.0268
THR 137ALA 138 0.0004
ALA 138GLU 139 0.0705
GLU 139LEU 140 -0.0001
LEU 140LYS 141 -0.0728
LYS 141ILE 142 -0.0001
ILE 142TYR 143 -0.1107
TYR 143SER 144 -0.0003
SER 144VAL 145 -0.0100
VAL 145ILE 146 0.0004
ILE 146GLN 147 -0.0193
GLN 147ALA 148 0.0001
ALA 148GLU 149 0.1193
GLU 149ILE 150 -0.0004
ILE 150ASN 151 0.0381
ASN 151LYS 152 0.0002
LYS 152HIS 153 0.0761
HIS 153LEU 154 0.0001
LEU 154SER 155 0.1205
SER 155SER 156 0.0000
SER 156SER 157 0.0376
SER 157GLY 158 0.0000
GLY 158THR 159 0.0804
THR 159ILE 160 0.0001
ILE 160ASN 161 0.0297
ASN 161ILE 162 -0.0000
ILE 162HIS 163 0.0225
HIS 163ASP 164 0.0000
ASP 164LYS 165 -0.0429
LYS 165SER 166 0.0001
SER 166ILE 167 -0.1323
ILE 167ASN 168 -0.0001
ASN 168LEU 169 -0.0551
LEU 169MET 170 -0.0001
MET 170ASP 171 0.1555
ASP 171LYS 172 -0.0002
LYS 172ASN 173 0.0082
ASN 173LEU 174 0.0002
LEU 174TYR 175 -0.0137
TYR 175GLY 176 -0.0002
GLY 176TYR 177 -0.0847
TYR 177THR 178 -0.0001
THR 178ASP 179 -0.0381
ASP 179GLU 180 0.0001
GLU 180GLU 181 -0.0813
GLU 181ILE 182 0.0003
ILE 182PHE 183 -0.0010
PHE 183LYS 184 -0.0000
LYS 184ALA 185 -0.0786
ALA 185SER 186 -0.0001
SER 186ALA 187 0.1681
ALA 187GLU 188 0.0000
GLU 188TYR 189 -0.0304
TYR 189LYS 190 0.0001
LYS 190ILE 191 0.1655
ILE 191LEU 192 -0.0001
LEU 192GLU 193 -0.1640
GLU 193LYS 194 0.0001
LYS 194MET 195 0.1260
MET 195PRO 196 0.0002
PRO 196GLN 197 -0.1332
GLN 197THR 198 0.0000
THR 198THR 199 0.2008
THR 199ILE 200 -0.0001
ILE 200GLN 201 0.0115
GLN 201VAL 202 -0.0004
VAL 202ASP 203 -0.1594
ASP 203GLY 204 0.0001
GLY 204SER 205 0.0347
SER 205GLU 206 0.0001
GLU 206LYS 207 -0.0857
LYS 207LYS 208 -0.0000
LYS 208ILE 209 0.0724
ILE 209VAL 210 -0.0000
VAL 210SER 211 0.0206
SER 211ILE 212 0.0001
ILE 212LYS 213 -0.1121
LYS 213ASP 214 -0.0004
ASP 214PHE 215 0.0068
PHE 215LEU 216 -0.0000
LEU 216GLY 217 0.0546
GLY 217SER 218 -0.0003
SER 218GLU 219 -0.0843
GLU 219ASN 220 0.0002
ASN 220LYS 221 -0.0779
LYS 221ARG 222 -0.0002
ARG 222THR 223 -0.0629
THR 223GLY 224 -0.0000
GLY 224ALA 225 0.0208
ALA 225LEU 226 0.0000
LEU 226GLY 227 -0.1217
GLY 227ASN 228 0.0001
ASN 228LEU 229 0.0591
LEU 229LYS 230 0.0001
LYS 230ASN 231 -0.0475
ASN 231SER 232 -0.0000
SER 232TYR 233 0.0239
TYR 233SER 234 -0.0002
SER 234TYR 235 0.1155
TYR 235ASN 236 0.0000
ASN 236LEU 237 0.0128
LEU 237ASN 238 0.0001
ASN 238ASP 239 0.0547
ASP 239LEU 240 0.0000
LEU 240VAL 241 -0.0361
VAL 241SER 242 0.0002
SER 242GLN 243 0.1014
GLN 243LYS 244 -0.0001
LYS 244THR 245 0.0503
THR 245THR 246 0.0000
THR 246GLN 247 0.1365
GLN 247LEU 248 -0.0000
LEU 248SER 249 0.0547
SER 249ASP 250 -0.0001
ASP 250ILE 251 0.0348
ILE 251THR 252 0.0002
THR 252SER 253 0.0117
SER 253ARG 254 0.0000
ARG 254PHE 255 0.0443
PHE 255ASN 256 -0.0003
ASN 256SER 257 -0.0266
SER 257ALA 258 0.0001
ALA 258ILE 259 0.0719
ILE 259GLU 260 0.0000
GLU 260ALA 261 -0.0243
ALA 261LEU 262 0.0001
LEU 262ASN 263 0.0461
ASN 263ARG 264 0.0002
ARG 264PHE 265 -0.0165
PHE 265ILE 266 -0.0003
ILE 266GLN 267 0.0603
GLN 267LYS 268 -0.0002
LYS 268TYR 269 -0.0402
TYR 269ASP 270 0.0003
ASP 270SER 271 0.0675
SER 271VAL 272 -0.0001
VAL 272MET 273 -0.0696
MET 273GLN 274 -0.0001
GLN 274ARG 275 -0.0145
ARG 275LEU 276 0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.