CNRS Nantes University US2B US2B
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***  1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220090321150899

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 -0.0436
ALA 2SER 3 0.0250
SER 3LYS 4 -0.0606
LYS 4GLU 5 0.0484
GLU 5TYR 6 -0.0145
TYR 6GLY 7 0.0759
GLY 7VAL 8 0.0250
VAL 8THR 9 0.0289
THR 9ILE 10 0.1157
ILE 10GLY 11 -0.0623
GLY 11GLU 12 0.0552
GLU 12SER 13 -0.0140
SER 13ARG 14 0.0309
ARG 14ILE 15 0.0422
ILE 15ILE 16 0.0150
ILE 16TYR 17 -0.0231
TYR 17PRO 18 0.0368
PRO 18LEU 19 0.0239
LEU 19ASP 20 0.0165
ASP 20ALA 21 0.0216
ALA 21ALA 22 -0.0107
ALA 22GLY 23 -0.0042
GLY 23VAL 24 -0.0370
VAL 24MET 25 0.0188
MET 25VAL 26 -0.0656
VAL 26SER 27 0.0053
SER 27SER 28 -0.0471
SER 28VAL 29 0.0257
VAL 29VAL 30 0.0142
VAL 30VAL 31 -0.0083
VAL 31LYS 32 0.0045
LYS 32ASN 33 0.0322
ASN 33THR 34 -0.0176
THR 34GLN 35 0.0231
GLN 35ASP 36 0.0010
ASP 36TYR 37 -0.0009
TYR 37PRO 38 -0.0078
PRO 38VAL 39 0.0328
VAL 39LEU 40 -0.0239
LEU 40ILE 41 -0.0022
ILE 41GLN 42 0.0140
GLN 42SER 43 -0.0413
SER 43ARG 44 0.0268
ARG 44ILE 45 -0.0318
ILE 45TYR 46 0.0082
TYR 46ASP 47 -0.0363
ASP 47PRO 48 -0.0055
PRO 48PHE 49 -0.0056
PHE 49VAL 50 -0.0042
VAL 50VAL 51 -0.0212
VAL 51VAL 52 -0.0538
VAL 52THR 53 0.0633
THR 53PRO 54 -0.1647
PRO 54PRO 55 0.0391
PRO 55LEU 56 -0.0504
LEU 56PHE 57 0.0225
PHE 57ARG 58 -0.0411
ARG 58LEU 59 0.0123
LEU 59ASP 60 -0.0070
ASP 60ALA 61 0.0060
ALA 61LYS 62 -0.0029
LYS 62GLN 63 -0.0035
GLN 63GLN 64 -0.0143
GLN 64ASN 65 -0.0044
ASN 65SER 66 -0.0347
SER 66SER 67 0.0184
SER 67LEU 68 0.0101
LEU 68ARG 69 -0.0473
ARG 69ILE 70 0.0007
ILE 70ALA 71 0.0450
ALA 71GLN 72 -0.0596
GLN 72ALA 73 -0.0081
ALA 73GLY 74 -0.0083
GLY 74GLY 75 -0.0033
GLY 75VAL 76 -0.0099
VAL 76PHE 77 -0.0008
PHE 77PRO 78 -0.0265
PRO 78ARG 79 0.0187
ARG 79ASP 80 -0.0687
ASP 80LYS 81 0.0225
LYS 81GLU 82 0.0216
GLU 82SER 83 0.0060
SER 83LEU 84 0.0472
LEU 84LYS 85 0.0675
LYS 85TRP 86 0.0354
TRP 86LEU 87 0.0569
LEU 87CYS 88 0.0199
CYS 88VAL 89 0.0348
VAL 89LYS 90 0.0433
LYS 90GLY 91 0.0297
GLY 91ILE 92 0.0397
ILE 92PRO 93 0.0128
PRO 93LYS 94 0.0660
LYS 94ASP 95 -0.0862
ASP 95VAL 96 0.0261
VAL 96GLY 97 -0.0584
GLY 97VAL 98 -0.0578
VAL 98PHE 99 0.0423
PHE 99VAL 100 0.0166
VAL 100GLN 101 -0.0003
GLN 101PHE 102 0.0601
PHE 102ALA 103 -0.0551
ALA 103ILE 104 0.0217
ILE 104ASN 105 0.0261
ASN 105ASN 106 0.0430
ASN 106CYS 107 0.1567
CYS 107ILE 108 0.0724
ILE 108LYS 109 0.1587
LYS 109LEU 110 0.0861
LEU 110LEU 111 0.0300
LEU 111VAL 112 0.0347
VAL 112ARG 113 0.0072
ARG 113PRO 114 0.0320
PRO 114ASN 115 0.0176
ASN 115GLU 116 -0.0403
GLU 116LEU 117 -0.0243
LEU 117LYS 118 0.0172
LYS 118GLY 119 0.0030
GLY 119THR 120 0.0197
THR 120PRO 121 0.0180
PRO 121ILE 122 -0.0246
ILE 122GLN 123 0.0185
GLN 123PHE 124 0.0137
PHE 124ALA 125 -0.0533
ALA 125GLU 126 0.0123
GLU 126ASN 127 0.0078
ASN 127LEU 128 -0.0019
LEU 128SER 129 0.0004
SER 129TRP 130 -0.0392
TRP 130LYS 131 -0.0074
LYS 131VAL 132 -0.0229
VAL 132ASP 133 -0.0017
ASP 133GLY 134 -0.0105
GLY 134GLY 135 0.0001
GLY 135LYS 136 0.0034
LYS 136LEU 137 -0.0100
LEU 137ILE 138 -0.0194
ILE 138ALA 139 -0.0023
ALA 139GLU 140 -0.0179
GLU 140ASN 141 -0.0309
ASN 141PRO 142 0.0257
PRO 142SER 143 -0.0294
SER 143PRO 144 -0.0736
PRO 144PHE 145 0.0092
PHE 145TYR 146 0.0329
TYR 146MET 147 0.0041
MET 147ASN 148 0.0341
ASN 148ILE 149 0.0610
ILE 149GLY 150 -0.0119
GLY 150GLU 151 0.0247
GLU 151LEU 152 0.0052
LEU 152THR 153 0.0188
THR 153PHE 154 0.0099
PHE 154GLY 155 0.0061
GLY 155GLY 156 0.0017
GLY 156LYS 157 0.0046
LYS 157SER 158 0.0103
SER 158ILE 159 -0.0043
ILE 159PRO 160 0.0197
PRO 160SER 161 0.0151
SER 161HIS 162 0.0281
HIS 162TYR 163 0.0137
TYR 163ILE 164 0.0552
ILE 164PRO 165 -0.0034
PRO 165PRO 166 0.0020
PRO 166LYS 167 0.0106
LYS 167SER 168 -0.0616
SER 168THR 169 -0.0210
THR 169TRP 170 -0.0080
TRP 170ALA 171 0.0195
ALA 171PHE 172 -0.0214
PHE 172ASP 173 0.0205
ASP 173LEU 174 -0.0009
LEU 174PRO 175 0.0040
PRO 175ASN 176 -0.0048
ASN 176VAL 177 -0.0051
VAL 177SER 178 0.0088
SER 178TRP 179 0.0094
TRP 179ARG 180 0.0114
ARG 180ILE 181 -0.0047
ILE 181ILE 182 0.0561
ILE 182ASN 183 -0.0014
ASN 183ASP 184 -0.0337
ASP 184GLN 185 0.0232
GLN 185GLY 186 0.0212
GLY 186GLY 187 0.0210
GLY 187LEU 188 0.0251
LEU 188ASP 189 0.0048
ASP 189ARG 190 0.0069
ARG 190LEU 191 0.0018
LEU 191TYR 192 -0.0035
TYR 192SER 193 -0.0095
SER 193LYS 194 0.0094
LYS 194ASN 195 -0.0015
ASN 195VAL 196 0.0103

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.