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***  1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220090321150899

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 0.0040
ALA 2SER 3 0.0469
SER 3LYS 4 -0.0233
LYS 4GLU 5 -0.0472
GLU 5TYR 6 -0.0179
TYR 6GLY 7 0.0424
GLY 7VAL 8 0.0392
VAL 8THR 9 0.0017
THR 9ILE 10 0.0491
ILE 10GLY 11 -0.0211
GLY 11GLU 12 0.0166
GLU 12SER 13 0.0020
SER 13ARG 14 0.0094
ARG 14ILE 15 0.0095
ILE 15ILE 16 0.0041
ILE 16TYR 17 0.0030
TYR 17PRO 18 0.0073
PRO 18LEU 19 0.0054
LEU 19ASP 20 0.0029
ASP 20ALA 21 0.0036
ALA 21ALA 22 -0.0039
ALA 22GLY 23 0.0032
GLY 23VAL 24 -0.0100
VAL 24MET 25 0.0068
MET 25VAL 26 -0.0218
VAL 26SER 27 0.0055
SER 27SER 28 -0.0207
SER 28VAL 29 0.0055
VAL 29VAL 30 -0.0005
VAL 30VAL 31 -0.0033
VAL 31LYS 32 0.0007
LYS 32ASN 33 0.0039
ASN 33THR 34 0.0052
THR 34GLN 35 0.0084
GLN 35ASP 36 0.0208
ASP 36TYR 37 -0.0162
TYR 37PRO 38 -0.0149
PRO 38VAL 39 0.0043
VAL 39LEU 40 -0.0141
LEU 40ILE 41 -0.0003
ILE 41GLN 42 -0.0005
GLN 42SER 43 -0.0073
SER 43ARG 44 -0.0034
ARG 44ILE 45 -0.0032
ILE 45TYR 46 -0.0026
TYR 46ASP 47 0.0075
ASP 47PRO 48 -0.0015
PRO 48PHE 49 0.0014
PHE 49VAL 50 -0.0025
VAL 50VAL 51 -0.0112
VAL 51VAL 52 -0.0149
VAL 52THR 53 0.0128
THR 53PRO 54 -0.0512
PRO 54PRO 55 0.0151
PRO 55LEU 56 -0.0177
LEU 56PHE 57 0.0021
PHE 57ARG 58 -0.0302
ARG 58LEU 59 0.0092
LEU 59ASP 60 -0.0119
ASP 60ALA 61 -0.0078
ALA 61LYS 62 0.0049
LYS 62GLN 63 -0.0103
GLN 63GLN 64 -0.0133
GLN 64ASN 65 -0.0109
ASN 65SER 66 -0.0138
SER 66SER 67 0.0021
SER 67LEU 68 0.0015
LEU 68ARG 69 -0.0163
ARG 69ILE 70 -0.0042
ILE 70ALA 71 0.0073
ALA 71GLN 72 -0.0209
GLN 72ALA 73 -0.0005
ALA 73GLY 74 -0.0046
GLY 74GLY 75 -0.0020
GLY 75VAL 76 -0.0029
VAL 76PHE 77 0.0001
PHE 77PRO 78 -0.0093
PRO 78ARG 79 0.0050
ARG 79ASP 80 -0.0194
ASP 80LYS 81 0.0065
LYS 81GLU 82 0.0076
GLU 82SER 83 0.0017
SER 83LEU 84 0.0172
LEU 84LYS 85 0.0064
LYS 85TRP 86 0.0162
TRP 86LEU 87 0.0060
LEU 87CYS 88 0.0103
CYS 88VAL 89 0.0137
VAL 89LYS 90 0.0081
LYS 90GLY 91 0.0086
GLY 91ILE 92 0.0067
ILE 92PRO 93 -0.0008
PRO 93LYS 94 0.0043
LYS 94ASP 95 -0.0065
ASP 95VAL 96 0.0037
VAL 96GLY 97 -0.0048
GLY 97VAL 98 -0.0013
VAL 98PHE 99 0.0007
PHE 99VAL 100 0.0010
VAL 100GLN 101 0.0007
GLN 101PHE 102 0.0014
PHE 102ALA 103 0.0063
ALA 103ILE 104 -0.0012
ILE 104ASN 105 0.0429
ASN 105ASN 106 0.0039
ASN 106CYS 107 0.0593
CYS 107ILE 108 0.0134
ILE 108LYS 109 0.0426
LYS 109LEU 110 0.0169
LEU 110LEU 111 0.0083
LEU 111VAL 112 0.0077
VAL 112ARG 113 0.0050
ARG 113PRO 114 0.0080
PRO 114ASN 115 0.0016
ASN 115GLU 116 -0.0102
GLU 116LEU 117 -0.0027
LEU 117LYS 118 0.0036
LYS 118GLY 119 0.0021
GLY 119THR 120 0.0048
THR 120PRO 121 0.0028
PRO 121ILE 122 -0.0040
ILE 122GLN 123 0.0027
GLN 123PHE 124 0.0024
PHE 124ALA 125 -0.0088
ALA 125GLU 126 0.0023
GLU 126ASN 127 0.0009
ASN 127LEU 128 -0.0002
LEU 128SER 129 0.0008
SER 129TRP 130 -0.0079
TRP 130LYS 131 -0.0002
LYS 131VAL 132 -0.0048
VAL 132ASP 133 0.0008
ASP 133GLY 134 -0.0023
GLY 134GLY 135 0.0015
GLY 135LYS 136 -0.0002
LYS 136LEU 137 -0.0010
LEU 137ILE 138 -0.0045
ILE 138ALA 139 -0.0015
ALA 139GLU 140 -0.0038
GLU 140ASN 141 -0.0076
ASN 141PRO 142 0.0056
PRO 142SER 143 -0.0063
SER 143PRO 144 -0.0153
PRO 144PHE 145 0.0017
PHE 145TYR 146 0.0071
TYR 146MET 147 -0.0034
MET 147ASN 148 0.0091
ASN 148ILE 149 0.0114
ILE 149GLY 150 -0.0026
GLY 150GLU 151 0.0057
GLU 151LEU 152 0.0030
LEU 152THR 153 0.0029
THR 153PHE 154 0.0032
PHE 154GLY 155 0.0005
GLY 155GLY 156 -0.0002
GLY 156LYS 157 0.0004
LYS 157SER 158 0.0017
SER 158ILE 159 -0.0013
ILE 159PRO 160 0.0023
PRO 160SER 161 0.0032
SER 161HIS 162 0.0016
HIS 162TYR 163 0.0006
TYR 163ILE 164 0.0099
ILE 164PRO 165 -0.0025
PRO 165PRO 166 -0.0011
PRO 166LYS 167 0.0034
LYS 167SER 168 -0.0168
SER 168THR 169 -0.0081
THR 169TRP 170 -0.0015
TRP 170ALA 171 0.0008
ALA 171PHE 172 -0.0045
PHE 172ASP 173 0.0027
ASP 173LEU 174 -0.0004
LEU 174PRO 175 0.0008
PRO 175ASN 176 -0.0004
ASN 176VAL 177 -0.0011
VAL 177SER 178 0.0022
SER 178TRP 179 0.0025
TRP 179ARG 180 0.0042
ARG 180ILE 181 -0.0004
ILE 181ILE 182 0.0161
ILE 182ASN 183 -0.0004
ASN 183ASP 184 -0.0021
ASP 184GLN 185 0.0049
GLN 185GLY 186 0.0054
GLY 186GLY 187 0.0042
GLY 187LEU 188 0.0080
LEU 188ASP 189 0.0008
ASP 189ARG 190 0.0017
ARG 190LEU 191 0.0013
LEU 191TYR 192 -0.0008
TYR 192SER 193 0.0001
SER 193LYS 194 0.0021
LYS 194ASN 195 -0.0000
ASN 195VAL 196 0.0020

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.