CNRS Nantes University US2B US2B
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***  1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220090321150899

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 0.1916
ALA 2SER 3 0.0023
SER 3LYS 4 -0.0857
LYS 4GLU 5 -0.0274
GLU 5TYR 6 0.0840
TYR 6GLY 7 -0.0973
GLY 7VAL 8 -0.3752
VAL 8THR 9 0.0029
THR 9ILE 10 -0.1675
ILE 10GLY 11 0.0543
GLY 11GLU 12 -0.0427
GLU 12SER 13 0.0397
SER 13ARG 14 -0.0242
ARG 14ILE 15 0.0267
ILE 15ILE 16 -0.0341
ILE 16TYR 17 0.0323
TYR 17PRO 18 -0.0145
PRO 18LEU 19 -0.0026
LEU 19ASP 20 0.0045
ASP 20ALA 21 -0.0057
ALA 21ALA 22 0.0002
ALA 22GLY 23 -0.0070
GLY 23VAL 24 -0.0096
VAL 24MET 25 0.0070
MET 25VAL 26 -0.0173
VAL 26SER 27 0.0115
SER 27SER 28 -0.0151
SER 28VAL 29 -0.0151
VAL 29VAL 30 -0.0204
VAL 30VAL 31 -0.0006
VAL 31LYS 32 -0.0334
LYS 32ASN 33 0.0140
ASN 33THR 34 -0.0856
THR 34GLN 35 0.0004
GLN 35ASP 36 -0.0233
ASP 36TYR 37 -0.0009
TYR 37PRO 38 0.0082
PRO 38VAL 39 0.0139
VAL 39LEU 40 0.0549
LEU 40ILE 41 -0.0559
ILE 41GLN 42 0.0149
GLN 42SER 43 -0.0503
SER 43ARG 44 0.0121
ARG 44ILE 45 -0.0403
ILE 45TYR 46 0.0175
TYR 46ASP 47 -0.0216
ASP 47PRO 48 -0.0006
PRO 48PHE 49 -0.0005
PHE 49VAL 50 -0.0001
VAL 50VAL 51 -0.0009
VAL 51VAL 52 -0.0126
VAL 52THR 53 0.0086
THR 53PRO 54 -0.0020
PRO 54PRO 55 0.0009
PRO 55LEU 56 -0.0220
LEU 56PHE 57 0.0248
PHE 57ARG 58 0.0615
ARG 58LEU 59 -0.0274
LEU 59ASP 60 0.0358
ASP 60ALA 61 -0.0068
ALA 61LYS 62 -0.0044
LYS 62GLN 63 0.0127
GLN 63GLN 64 0.0355
GLN 64ASN 65 0.0111
ASN 65SER 66 0.0030
SER 66SER 67 -0.0018
SER 67LEU 68 0.0084
LEU 68ARG 69 -0.0156
ARG 69ILE 70 0.0057
ILE 70ALA 71 -0.0031
ALA 71GLN 72 -0.0152
GLN 72ALA 73 0.0056
ALA 73GLY 74 -0.0016
GLY 74GLY 75 0.0009
GLY 75VAL 76 -0.0044
VAL 76PHE 77 0.0029
PHE 77PRO 78 -0.0160
PRO 78ARG 79 -0.0009
ARG 79ASP 80 0.0006
ASP 80LYS 81 0.0013
LYS 81GLU 82 -0.0091
GLU 82SER 83 -0.0180
SER 83LEU 84 -0.0124
LEU 84LYS 85 -0.0261
LYS 85TRP 86 -0.0362
TRP 86LEU 87 -0.0081
LEU 87CYS 88 -0.0269
CYS 88VAL 89 -0.0424
VAL 89LYS 90 -0.0250
LYS 90GLY 91 -0.0424
GLY 91ILE 92 -0.0406
ILE 92PRO 93 0.1028
PRO 93LYS 94 0.1326
LYS 94ASP 95 -0.2294
ASP 95VAL 96 0.2179
VAL 96GLY 97 -0.1805
GLY 97VAL 98 -0.1293
VAL 98PHE 99 0.0912
PHE 99VAL 100 0.0396
VAL 100GLN 101 0.1026
GLN 101PHE 102 0.0048
PHE 102ALA 103 0.0950
ALA 103ILE 104 -0.0762
ILE 104ASN 105 -0.1001
ASN 105ASN 106 0.0311
ASN 106CYS 107 -0.1040
CYS 107ILE 108 -0.0098
ILE 108LYS 109 -0.0607
LYS 109LEU 110 0.0015
LEU 110LEU 111 -0.0316
LEU 111VAL 112 0.0065
VAL 112ARG 113 -0.0043
ARG 113PRO 114 -0.0061
PRO 114ASN 115 -0.0007
ASN 115GLU 116 0.0002
GLU 116LEU 117 0.0035
LEU 117LYS 118 -0.0052
LYS 118GLY 119 -0.0162
GLY 119THR 120 -0.0100
THR 120PRO 121 -0.0027
PRO 121ILE 122 -0.0009
ILE 122GLN 123 -0.0021
GLN 123PHE 124 0.0012
PHE 124ALA 125 -0.0067
ALA 125GLU 126 0.0013
GLU 126ASN 127 -0.0076
ASN 127LEU 128 0.0035
LEU 128SER 129 0.0073
SER 129TRP 130 -0.0073
TRP 130LYS 131 0.0110
LYS 131VAL 132 -0.0016
VAL 132ASP 133 0.0087
ASP 133GLY 134 0.0019
GLY 134GLY 135 0.0008
GLY 135LYS 136 -0.0004
LYS 136LEU 137 0.0014
LEU 137ILE 138 0.0007
ILE 138ALA 139 -0.0000
ALA 139GLU 140 0.0058
GLU 140ASN 141 -0.0067
ASN 141PRO 142 0.0066
PRO 142SER 143 0.0012
SER 143PRO 144 -0.0120
PRO 144PHE 145 0.0038
PHE 145TYR 146 -0.0016
TYR 146MET 147 0.0033
MET 147ASN 148 -0.0075
ASN 148ILE 149 0.0182
ILE 149GLY 150 -0.0008
GLY 150GLU 151 0.0129
GLU 151LEU 152 -0.0021
LEU 152THR 153 0.0094
THR 153PHE 154 0.0043
PHE 154GLY 155 0.0017
GLY 155GLY 156 0.0010
GLY 156LYS 157 0.0030
LYS 157SER 158 0.0066
SER 158ILE 159 0.0014
ILE 159PRO 160 0.0086
PRO 160SER 161 0.0034
SER 161HIS 162 0.0196
HIS 162TYR 163 0.0159
TYR 163ILE 164 -0.0021
ILE 164PRO 165 0.0057
PRO 165PRO 166 0.0187
PRO 166LYS 167 -0.0185
LYS 167SER 168 0.0118
SER 168THR 169 0.0017
THR 169TRP 170 0.0038
TRP 170ALA 171 0.0041
ALA 171PHE 172 0.0027
PHE 172ASP 173 0.0048
ASP 173LEU 174 0.0031
LEU 174PRO 175 0.0013
PRO 175ASN 176 0.0003
ASN 176VAL 177 0.0012
VAL 177SER 178 0.0058
SER 178TRP 179 0.0053
TRP 179ARG 180 0.0071
ARG 180ILE 181 0.0035
ILE 181ILE 182 0.0097
ILE 182ASN 183 0.0032
ASN 183ASP 184 0.0239
ASP 184GLN 185 -0.0012
GLN 185GLY 186 0.0021
GLY 186GLY 187 0.0101
GLY 187LEU 188 0.0198
LEU 188ASP 189 -0.0005
ASP 189ARG 190 0.0077
ARG 190LEU 191 0.0046
LEU 191TYR 192 -0.0008
TYR 192SER 193 0.0117
SER 193LYS 194 0.0071
LYS 194ASN 195 0.0014
ASN 195VAL 196 0.0066

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.