CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220090321150899

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 0.0896
ALA 2SER 3 0.0494
SER 3LYS 4 -0.1143
LYS 4GLU 5 0.0828
GLU 5TYR 6 0.0760
TYR 6GLY 7 -0.1674
GLY 7VAL 8 -0.0652
VAL 8THR 9 -0.0420
THR 9ILE 10 -0.0974
ILE 10GLY 11 0.0118
GLY 11GLU 12 -0.0154
GLU 12SER 13 0.0106
SER 13ARG 14 -0.0198
ARG 14ILE 15 0.0158
ILE 15ILE 16 -0.0408
ILE 16TYR 17 -0.1616
TYR 17PRO 18 0.0044
PRO 18LEU 19 -0.0021
LEU 19ASP 20 0.0095
ASP 20ALA 21 -0.0052
ALA 21ALA 22 0.0873
ALA 22GLY 23 0.0858
GLY 23VAL 24 0.0103
VAL 24MET 25 -0.0177
MET 25VAL 26 0.0433
VAL 26SER 27 -0.0340
SER 27SER 28 0.0613
SER 28VAL 29 -0.0224
VAL 29VAL 30 -0.0049
VAL 30VAL 31 0.0067
VAL 31LYS 32 -0.0392
LYS 32ASN 33 -0.0127
ASN 33THR 34 -0.0467
THR 34GLN 35 -0.0298
GLN 35ASP 36 0.0690
ASP 36TYR 37 -0.0489
TYR 37PRO 38 -0.0308
PRO 38VAL 39 -0.0598
VAL 39LEU 40 -0.0160
LEU 40ILE 41 0.0238
ILE 41GLN 42 -0.0437
GLN 42SER 43 0.0385
SER 43ARG 44 -0.0314
ARG 44ILE 45 -0.0127
ILE 45TYR 46 -0.0075
TYR 46ASP 47 -0.0397
ASP 47PRO 48 0.0632
PRO 48PHE 49 -0.0269
PHE 49VAL 50 -0.0309
VAL 50VAL 51 0.0057
VAL 51VAL 52 -0.0261
VAL 52THR 53 0.0138
THR 53PRO 54 0.0695
PRO 54PRO 55 -0.0138
PRO 55LEU 56 0.0332
LEU 56PHE 57 -0.0448
PHE 57ARG 58 -0.0211
ARG 58LEU 59 -0.0057
LEU 59ASP 60 -0.0161
ASP 60ALA 61 -0.0523
ALA 61LYS 62 0.0275
LYS 62GLN 63 -0.0232
GLN 63GLN 64 0.0108
GLN 64ASN 65 -0.0521
ASN 65SER 66 0.0476
SER 66SER 67 -0.0396
SER 67LEU 68 0.0083
LEU 68ARG 69 0.0067
ARG 69ILE 70 0.0126
ILE 70ALA 71 -0.0177
ALA 71GLN 72 0.0295
GLN 72ALA 73 -0.0398
ALA 73GLY 74 0.0099
GLY 74GLY 75 -0.0101
GLY 75VAL 76 -0.0089
VAL 76PHE 77 0.0231
PHE 77PRO 78 0.0138
PRO 78ARG 79 -0.0116
ARG 79ASP 80 0.0683
ASP 80LYS 81 -0.0036
LYS 81GLU 82 -0.0440
GLU 82SER 83 -0.0370
SER 83LEU 84 -0.0526
LEU 84LYS 85 0.1443
LYS 85TRP 86 -0.0745
TRP 86LEU 87 0.1110
LEU 87CYS 88 -0.0346
CYS 88VAL 89 0.0031
VAL 89LYS 90 -0.0266
LYS 90GLY 91 -0.0377
GLY 91ILE 92 -0.0338
ILE 92PRO 93 -0.0440
PRO 93LYS 94 -0.1294
LYS 94ASP 95 0.1936
ASP 95VAL 96 -0.1095
VAL 96GLY 97 0.1569
GLY 97VAL 98 0.1217
VAL 98PHE 99 -0.0945
PHE 99VAL 100 -0.0259
VAL 100GLN 101 -0.0177
GLN 101PHE 102 -0.0663
PHE 102ALA 103 0.1016
ALA 103ILE 104 0.0034
ILE 104ASN 105 0.0438
ASN 105ASN 106 -0.0564
ASN 106CYS 107 -0.0621
CYS 107ILE 108 -0.0499
ILE 108LYS 109 -0.0130
LYS 109LEU 110 0.1043
LEU 110LEU 111 -0.0398
LEU 111VAL 112 0.0193
VAL 112ARG 113 -0.0752
ARG 113PRO 114 -0.0187
PRO 114ASN 115 0.0639
ASN 115GLU 116 0.0178
GLU 116LEU 117 -0.0891
LEU 117LYS 118 0.0080
LYS 118GLY 119 -0.0370
GLY 119THR 120 -0.0008
THR 120PRO 121 0.0511
PRO 121ILE 122 -0.0543
ILE 122GLN 123 0.0339
GLN 123PHE 124 0.0267
PHE 124ALA 125 -0.1226
ALA 125GLU 126 0.0177
GLU 126ASN 127 0.0431
ASN 127LEU 128 -0.0271
LEU 128SER 129 -0.0277
SER 129TRP 130 -0.0623
TRP 130LYS 131 -0.0465
LYS 131VAL 132 -0.0395
VAL 132ASP 133 -0.0394
ASP 133GLY 134 -0.0114
GLY 134GLY 135 -0.0478
GLY 135LYS 136 0.0348
LYS 136LEU 137 -0.0505
LEU 137ILE 138 0.0008
ILE 138ALA 139 0.0266
ALA 139GLU 140 -0.0195
GLU 140ASN 141 0.0066
ASN 141PRO 142 0.0095
PRO 142SER 143 -0.0388
SER 143PRO 144 -0.0713
PRO 144PHE 145 0.0130
PHE 145TYR 146 0.0252
TYR 146MET 147 0.0810
MET 147ASN 148 0.0026
ASN 148ILE 149 0.1143
ILE 149GLY 150 -0.0099
GLY 150GLU 151 0.0271
GLU 151LEU 152 -0.0263
LEU 152THR 153 0.0453
THR 153PHE 154 -0.0119
PHE 154GLY 155 0.0251
GLY 155GLY 156 0.0197
GLY 156LYS 157 0.0185
LYS 157SER 158 0.0234
SER 158ILE 159 -0.0082
ILE 159PRO 160 0.0709
PRO 160SER 161 0.0443
SER 161HIS 162 0.1196
HIS 162TYR 163 0.0690
TYR 163ILE 164 0.0667
ILE 164PRO 165 0.0500
PRO 165PRO 166 0.0425
PRO 166LYS 167 -0.0212
LYS 167SER 168 0.0511
SER 168THR 169 0.0925
THR 169TRP 170 -0.0252
TRP 170ALA 171 0.1494
ALA 171PHE 172 -0.0333
PHE 172ASP 173 0.0804
ASP 173LEU 174 -0.0046
LEU 174PRO 175 0.0142
PRO 175ASN 176 -0.0244
ASN 176VAL 177 -0.0232
VAL 177SER 178 -0.0045
SER 178TRP 179 -0.0098
TRP 179ARG 180 -0.0243
ARG 180ILE 181 -0.0264
ILE 181ILE 182 -0.0105
ILE 182ASN 183 0.0142
ASN 183ASP 184 -0.1327
ASP 184GLN 185 0.0315
GLN 185GLY 186 0.0066
GLY 186GLY 187 -0.0280
GLY 187LEU 188 -0.0533
LEU 188ASP 189 0.0241
ASP 189ARG 190 -0.0239
ARG 190LEU 191 -0.0363
LEU 191TYR 192 0.0053
TYR 192SER 193 -0.0925
SER 193LYS 194 0.0142
LYS 194ASN 195 -0.0193
ASN 195VAL 196 0.0100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.