This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ALA 2
0.0896
ALA 2
SER 3
0.0494
SER 3
LYS 4
-0.1143
LYS 4
GLU 5
0.0828
GLU 5
TYR 6
0.0760
TYR 6
GLY 7
-0.1674
GLY 7
VAL 8
-0.0652
VAL 8
THR 9
-0.0420
THR 9
ILE 10
-0.0974
ILE 10
GLY 11
0.0118
GLY 11
GLU 12
-0.0154
GLU 12
SER 13
0.0106
SER 13
ARG 14
-0.0198
ARG 14
ILE 15
0.0158
ILE 15
ILE 16
-0.0408
ILE 16
TYR 17
-0.1616
TYR 17
PRO 18
0.0044
PRO 18
LEU 19
-0.0021
LEU 19
ASP 20
0.0095
ASP 20
ALA 21
-0.0052
ALA 21
ALA 22
0.0873
ALA 22
GLY 23
0.0858
GLY 23
VAL 24
0.0103
VAL 24
MET 25
-0.0177
MET 25
VAL 26
0.0433
VAL 26
SER 27
-0.0340
SER 27
SER 28
0.0613
SER 28
VAL 29
-0.0224
VAL 29
VAL 30
-0.0049
VAL 30
VAL 31
0.0067
VAL 31
LYS 32
-0.0392
LYS 32
ASN 33
-0.0127
ASN 33
THR 34
-0.0467
THR 34
GLN 35
-0.0298
GLN 35
ASP 36
0.0690
ASP 36
TYR 37
-0.0489
TYR 37
PRO 38
-0.0308
PRO 38
VAL 39
-0.0598
VAL 39
LEU 40
-0.0160
LEU 40
ILE 41
0.0238
ILE 41
GLN 42
-0.0437
GLN 42
SER 43
0.0385
SER 43
ARG 44
-0.0314
ARG 44
ILE 45
-0.0127
ILE 45
TYR 46
-0.0075
TYR 46
ASP 47
-0.0397
ASP 47
PRO 48
0.0632
PRO 48
PHE 49
-0.0269
PHE 49
VAL 50
-0.0309
VAL 50
VAL 51
0.0057
VAL 51
VAL 52
-0.0261
VAL 52
THR 53
0.0138
THR 53
PRO 54
0.0695
PRO 54
PRO 55
-0.0138
PRO 55
LEU 56
0.0332
LEU 56
PHE 57
-0.0448
PHE 57
ARG 58
-0.0211
ARG 58
LEU 59
-0.0057
LEU 59
ASP 60
-0.0161
ASP 60
ALA 61
-0.0523
ALA 61
LYS 62
0.0275
LYS 62
GLN 63
-0.0232
GLN 63
GLN 64
0.0108
GLN 64
ASN 65
-0.0521
ASN 65
SER 66
0.0476
SER 66
SER 67
-0.0396
SER 67
LEU 68
0.0083
LEU 68
ARG 69
0.0067
ARG 69
ILE 70
0.0126
ILE 70
ALA 71
-0.0177
ALA 71
GLN 72
0.0295
GLN 72
ALA 73
-0.0398
ALA 73
GLY 74
0.0099
GLY 74
GLY 75
-0.0101
GLY 75
VAL 76
-0.0089
VAL 76
PHE 77
0.0231
PHE 77
PRO 78
0.0138
PRO 78
ARG 79
-0.0116
ARG 79
ASP 80
0.0683
ASP 80
LYS 81
-0.0036
LYS 81
GLU 82
-0.0440
GLU 82
SER 83
-0.0370
SER 83
LEU 84
-0.0526
LEU 84
LYS 85
0.1443
LYS 85
TRP 86
-0.0745
TRP 86
LEU 87
0.1110
LEU 87
CYS 88
-0.0346
CYS 88
VAL 89
0.0031
VAL 89
LYS 90
-0.0266
LYS 90
GLY 91
-0.0377
GLY 91
ILE 92
-0.0338
ILE 92
PRO 93
-0.0440
PRO 93
LYS 94
-0.1294
LYS 94
ASP 95
0.1936
ASP 95
VAL 96
-0.1095
VAL 96
GLY 97
0.1569
GLY 97
VAL 98
0.1217
VAL 98
PHE 99
-0.0945
PHE 99
VAL 100
-0.0259
VAL 100
GLN 101
-0.0177
GLN 101
PHE 102
-0.0663
PHE 102
ALA 103
0.1016
ALA 103
ILE 104
0.0034
ILE 104
ASN 105
0.0438
ASN 105
ASN 106
-0.0564
ASN 106
CYS 107
-0.0621
CYS 107
ILE 108
-0.0499
ILE 108
LYS 109
-0.0130
LYS 109
LEU 110
0.1043
LEU 110
LEU 111
-0.0398
LEU 111
VAL 112
0.0193
VAL 112
ARG 113
-0.0752
ARG 113
PRO 114
-0.0187
PRO 114
ASN 115
0.0639
ASN 115
GLU 116
0.0178
GLU 116
LEU 117
-0.0891
LEU 117
LYS 118
0.0080
LYS 118
GLY 119
-0.0370
GLY 119
THR 120
-0.0008
THR 120
PRO 121
0.0511
PRO 121
ILE 122
-0.0543
ILE 122
GLN 123
0.0339
GLN 123
PHE 124
0.0267
PHE 124
ALA 125
-0.1226
ALA 125
GLU 126
0.0177
GLU 126
ASN 127
0.0431
ASN 127
LEU 128
-0.0271
LEU 128
SER 129
-0.0277
SER 129
TRP 130
-0.0623
TRP 130
LYS 131
-0.0465
LYS 131
VAL 132
-0.0395
VAL 132
ASP 133
-0.0394
ASP 133
GLY 134
-0.0114
GLY 134
GLY 135
-0.0478
GLY 135
LYS 136
0.0348
LYS 136
LEU 137
-0.0505
LEU 137
ILE 138
0.0008
ILE 138
ALA 139
0.0266
ALA 139
GLU 140
-0.0195
GLU 140
ASN 141
0.0066
ASN 141
PRO 142
0.0095
PRO 142
SER 143
-0.0388
SER 143
PRO 144
-0.0713
PRO 144
PHE 145
0.0130
PHE 145
TYR 146
0.0252
TYR 146
MET 147
0.0810
MET 147
ASN 148
0.0026
ASN 148
ILE 149
0.1143
ILE 149
GLY 150
-0.0099
GLY 150
GLU 151
0.0271
GLU 151
LEU 152
-0.0263
LEU 152
THR 153
0.0453
THR 153
PHE 154
-0.0119
PHE 154
GLY 155
0.0251
GLY 155
GLY 156
0.0197
GLY 156
LYS 157
0.0185
LYS 157
SER 158
0.0234
SER 158
ILE 159
-0.0082
ILE 159
PRO 160
0.0709
PRO 160
SER 161
0.0443
SER 161
HIS 162
0.1196
HIS 162
TYR 163
0.0690
TYR 163
ILE 164
0.0667
ILE 164
PRO 165
0.0500
PRO 165
PRO 166
0.0425
PRO 166
LYS 167
-0.0212
LYS 167
SER 168
0.0511
SER 168
THR 169
0.0925
THR 169
TRP 170
-0.0252
TRP 170
ALA 171
0.1494
ALA 171
PHE 172
-0.0333
PHE 172
ASP 173
0.0804
ASP 173
LEU 174
-0.0046
LEU 174
PRO 175
0.0142
PRO 175
ASN 176
-0.0244
ASN 176
VAL 177
-0.0232
VAL 177
SER 178
-0.0045
SER 178
TRP 179
-0.0098
TRP 179
ARG 180
-0.0243
ARG 180
ILE 181
-0.0264
ILE 181
ILE 182
-0.0105
ILE 182
ASN 183
0.0142
ASN 183
ASP 184
-0.1327
ASP 184
GLN 185
0.0315
GLN 185
GLY 186
0.0066
GLY 186
GLY 187
-0.0280
GLY 187
LEU 188
-0.0533
LEU 188
ASP 189
0.0241
ASP 189
ARG 190
-0.0239
ARG 190
LEU 191
-0.0363
LEU 191
TYR 192
0.0053
TYR 192
SER 193
-0.0925
SER 193
LYS 194
0.0142
LYS 194
ASN 195
-0.0193
ASN 195
VAL 196
0.0100
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.