CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  1AOL_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 240220085659142820

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN 1VAL 2 -0.0000
VAL 2TYR 3 0.1251
TYR 3ASN 4 -0.0004
ASN 4ILE 5 0.1042
ILE 5THR 6 0.0002
THR 6TRP 7 0.1827
TRP 7GLU 8 -0.0001
GLU 8VAL 9 0.1554
VAL 9THR 10 -0.0001
THR 10ASN 11 0.0456
ASN 11GLY 12 0.0002
GLY 12ASP 13 0.0411
ASP 13ARG 14 0.0003
ARG 14GLU 15 -0.0130
GLU 15THR 16 -0.0001
THR 16VAL 17 -0.0079
VAL 17TRP 18 -0.0001
TRP 18ALA 19 0.2739
ALA 19ILE 20 0.0002
ILE 20SER 21 0.3245
SER 21GLY 22 -0.0000
GLY 22ASN 23 0.3000
ASN 23HIS 24 -0.0002
HIS 24PRO 25 0.0153
PRO 25LEU 26 0.0001
LEU 26TRP 27 -0.2446
TRP 27THR 28 -0.0001
THR 28TRP 29 0.1230
TRP 29TRP 30 0.0002
TRP 30PRO 31 0.0680
PRO 31VAL 32 0.0000
VAL 32LEU 33 0.0034
LEU 33THR 34 0.0002
THR 34PRO 35 0.0081
PRO 35ASP 36 -0.0002
ASP 36LEU 37 0.0305
LEU 37CYS 38 0.0003
CYS 38MET 39 0.0323
MET 39LEU 40 -0.0003
LEU 40ALA 41 0.0053
ALA 41LEU 42 0.0002
LEU 42SER 43 -0.0031
SER 43GLY 44 0.0001
GLY 44PRO 45 0.0478
PRO 45PRO 46 0.0002
PRO 46HIS 47 0.0132
HIS 47TRP 48 0.0001
TRP 48GLY 49 -0.0652
GLY 49LEU 50 -0.0003
LEU 50GLU 51 -0.0351
GLU 51TYR 52 0.0002
TYR 52GLN 53 0.0407
GLN 53ALA 54 0.0004
ALA 54PRO 55 0.0372
PRO 55TYR 56 -0.0000
TYR 56SER 57 -0.0643
SER 57SER 58 0.0002
SER 58PRO 59 -0.0529
PRO 59PRO 60 -0.0002
PRO 60GLY 61 -0.5289
GLY 61PRO 62 0.0001
PRO 62PRO 63 0.1138
PRO 63CYS 64 0.0000
CYS 64CYS 65 -0.2161
CYS 65SER 66 0.0001
SER 66GLY 67 -0.0369
GLY 67SER 68 0.0000
SER 68SER 69 -0.0780
SER 69GLY 70 0.0005
GLY 70SER 71 0.0145
SER 71SER 72 -0.0002
SER 72ALA 73 -0.1489
ALA 73GLY 74 0.0002
GLY 74CYS 75 0.0017
CYS 75SER 76 -0.0005
SER 76ARG 77 0.0623
ARG 77ASP 78 -0.0001
ASP 78CYS 79 -0.1010
CYS 79ASP 80 0.0000
ASP 80GLU 81 0.0679
GLU 81PRO 82 -0.0003
PRO 82LEU 83 0.0361
LEU 83THR 84 -0.0000
THR 84SER 85 0.0258
SER 85LEU 86 -0.0000
LEU 86THR 87 0.0059
THR 87PRO 88 -0.0002
PRO 88ARG 89 -0.0313
ARG 89CYS 90 -0.0004
CYS 90ASN 91 -0.1513
ASN 91THR 92 0.0003
THR 92ALA 93 -0.0151
ALA 93TRP 94 -0.0003
TRP 94ASN 95 0.0164
ASN 95ARG 96 -0.0004
ARG 96LEU 97 -0.0126
LEU 97LYS 98 0.0001
LYS 98LEU 99 0.1290
LEU 99ASP 100 0.0006
ASP 100GLN 101 -0.0216
GLN 101VAL 102 0.0003
VAL 102THR 103 0.0587
THR 103HIS 104 0.0002
HIS 104LYS 105 -0.0559
LYS 105SER 106 -0.0001
SER 106SER 107 0.0152
SER 107GLU 108 0.0001
GLU 108GLY 109 0.0236
GLY 109PHE 110 -0.0002
PHE 110TYR 111 0.0121
TYR 111VAL 112 0.0001
VAL 112CYS 113 0.0099
CYS 113PRO 114 -0.0003
PRO 114GLY 115 -0.0150
GLY 115SER 116 0.0002
SER 116HIS 117 -0.0401
HIS 117ARG 118 0.0002
ARG 118PRO 119 0.4997
PRO 119ARG 120 -0.0001
ARG 120GLU 121 -0.0693
GLU 121ALA 122 -0.0001
ALA 122LYS 123 -0.1351
LYS 123SER 124 0.0002
SER 124CYS 125 0.0586
CYS 125GLY 126 -0.0001
GLY 126GLY 127 0.0959
GLY 127PRO 128 -0.0004
PRO 128ASP 129 0.0098
ASP 129SER 130 -0.0000
SER 130PHE 131 -0.0148
PHE 131TYR 132 -0.0001
TYR 132CYS 133 0.0360
CYS 133ALA 134 -0.0002
ALA 134SER 135 0.0216
SER 135TRP 136 0.0001
TRP 136GLY 137 -0.0114
GLY 137CYS 138 -0.0001
CYS 138GLU 139 -0.0886
GLU 139THR 140 0.0003
THR 140THR 141 -0.0395
THR 141GLY 142 0.0002
GLY 142ARG 143 0.0483
ARG 143VAL 144 -0.0002
VAL 144TYR 145 -0.0046
TYR 145TRP 146 0.0000
TRP 146LYS 147 -0.0011
LYS 147PRO 148 -0.0002
PRO 148SER 149 -0.0370
SER 149SER 150 -0.0000
SER 150SER 151 0.0288
SER 151TRP 152 -0.0001
TRP 152ASP 153 0.0722
ASP 153TYR 154 -0.0001
TYR 154ILE 155 0.0443
ILE 155THR 156 -0.0003
THR 156VAL 157 0.0404
VAL 157ASP 158 -0.0003
ASP 158ASN 159 0.0641
ASN 159ASN 160 0.0003
ASN 160LEU 161 0.0966
LEU 161THR 162 0.0000
THR 162THR 163 0.0420
THR 163SER 164 -0.0001
SER 164GLN 165 -0.0134
GLN 165ALA 166 -0.0001
ALA 166VAL 167 0.0274
VAL 167GLN 168 0.0000
GLN 168VAL 169 0.0228
VAL 169CYS 170 0.0002
CYS 170LYS 171 -0.0152
LYS 171ASP 172 -0.0001
ASP 172ASN 173 0.0166
ASN 173LYS 174 -0.0000
LYS 174TRP 175 -0.0600
TRP 175CYS 176 -0.0000
CYS 176ASN 177 -0.0171
ASN 177PRO 178 -0.0003
PRO 178LEU 179 0.0187
LEU 179ALA 180 0.0004
ALA 180ILE 181 0.0987
ILE 181GLN 182 -0.0003
GLN 182PHE 183 0.0490
PHE 183THR 184 0.0001
THR 184ASN 185 0.0965
ASN 185ALA 186 0.0000
ALA 186GLY 187 -0.0022
GLY 187LYS 188 -0.0003
LYS 188GLN 189 0.0744
GLN 189VAL 190 0.0002
VAL 190THR 191 0.0245
THR 191SER 192 -0.0001
SER 192TRP 193 0.0130
TRP 193THR 194 0.0001
THR 194THR 195 0.0331
THR 195GLY 196 0.0001
GLY 196HIS 197 0.1045
HIS 197TYR 198 0.0000
TYR 198TRP 199 0.0386
TRP 199GLY 200 0.0002
GLY 200LEU 201 0.0348
LEU 201ARG 202 0.0003
ARG 202LEU 203 0.0284
LEU 203TYR 204 -0.0001
TYR 204VAL 205 0.0604
VAL 205SER 206 -0.0001
SER 206GLY 207 0.0002
GLY 207ARG 208 -0.0000
ARG 208ASP 209 0.0012
ASP 209PRO 210 -0.0001
PRO 210GLY 211 0.1006
GLY 211LEU 212 0.0003
LEU 212THR 213 0.0254
THR 213PHE 214 0.0001
PHE 214GLY 215 0.0368
GLY 215ILE 216 -0.0000
ILE 216ARG 217 0.0780
ARG 217LEU 218 0.0003
LEU 218ARG 219 0.0939
ARG 219TYR 220 -0.0003
TYR 220GLN 221 0.2342
GLN 221ASN 222 0.0001
ASN 222LEU 223 0.0581
LEU 223GLY 224 0.0000
GLY 224PRO 225 0.2937
PRO 225ARG 226 -0.0001
ARG 226VAL 227 -0.0025
VAL 227PRO 228 0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.