CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 0.1047
GLY 2ASN 3 0.0050
ASN 3GLU 4 -0.0314
GLU 4GLY 5 0.3039
GLY 5VAL 6 0.0166
VAL 6ILE 7 -0.1153
ILE 7ILE 8 0.1626
ILE 8ASN 9 -0.0055
ASN 9ASN 10 -0.1160
ASN 10PHE 11 -0.0501
PHE 11TYR 12 0.0885
TYR 12SER 13 0.0896
SER 13ASN 14 -0.2699
ASN 14GLN 15 0.0953
GLN 15TYR 16 0.1782
TYR 16GLN 17 -0.0473
GLN 17ASN 18 -0.1767
ASN 18SER 19 0.1803
SER 19ILE 20 -0.0756
ILE 20ASP 21 -0.1054
ASP 21LEU 22 0.0593
LEU 22SER 23 0.0680
SER 23ALA 24 -0.0235
ALA 24SER 25 -0.0016

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.