This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
0.1047
GLY 2
ASN 3
0.0050
ASN 3
GLU 4
-0.0314
GLU 4
GLY 5
0.3039
GLY 5
VAL 6
0.0166
VAL 6
ILE 7
-0.1153
ILE 7
ILE 8
0.1626
ILE 8
ASN 9
-0.0055
ASN 9
ASN 10
-0.1160
ASN 10
PHE 11
-0.0501
PHE 11
TYR 12
0.0885
TYR 12
SER 13
0.0896
SER 13
ASN 14
-0.2699
ASN 14
GLN 15
0.0953
GLN 15
TYR 16
0.1782
TYR 16
GLN 17
-0.0473
GLN 17
ASN 18
-0.1767
ASN 18
SER 19
0.1803
SER 19
ILE 20
-0.0756
ILE 20
ASP 21
-0.1054
ASP 21
LEU 22
0.0593
LEU 22
SER 23
0.0680
SER 23
ALA 24
-0.0235
ALA 24
SER 25
-0.0016
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.