This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
0.0951
GLY 2
ASN 3
-0.1751
ASN 3
GLU 4
0.6937
GLU 4
GLY 5
0.3560
GLY 5
VAL 6
-0.4703
VAL 6
ILE 7
0.3706
ILE 7
ILE 8
0.2444
ILE 8
ASN 9
-0.1122
ASN 9
ASN 10
0.3196
ASN 10
PHE 11
0.3181
PHE 11
TYR 12
-0.2077
TYR 12
SER 13
0.4487
SER 13
ASN 14
0.1389
ASN 14
GLN 15
-0.1168
GLN 15
TYR 16
0.3599
TYR 16
GLN 17
0.0951
GLN 17
ASN 18
-0.1622
ASN 18
SER 19
0.3525
SER 19
ILE 20
-0.2897
ILE 20
ASP 21
-0.0821
ASP 21
LEU 22
0.2583
LEU 22
SER 23
-0.0396
SER 23
ALA 24
-0.2308
ALA 24
SER 25
0.1224
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.