This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 1
GLY 2
0.1872
GLY 2
ASN 3
0.0278
ASN 3
GLU 4
-0.0511
GLU 4
GLY 5
0.7683
GLY 5
VAL 6
0.2161
VAL 6
ILE 7
-0.4528
ILE 7
ILE 8
0.5948
ILE 8
ASN 9
0.0188
ASN 9
ASN 10
-0.1394
ASN 10
PHE 11
0.1985
PHE 11
TYR 12
0.0220
TYR 12
SER 13
-0.2060
SER 13
ASN 14
0.0991
ASN 14
GLN 15
0.0763
GLN 15
TYR 16
-0.4829
TYR 16
GLN 17
-0.2200
GLN 17
ASN 18
0.3816
ASN 18
SER 19
-0.4453
SER 19
ILE 20
0.1202
ILE 20
ASP 21
0.2031
ASP 21
LEU 22
-0.1437
LEU 22
SER 23
-0.2178
SER 23
ALA 24
0.0462
ALA 24
SER 25
-0.0058
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.