CNRS Nantes University US2B US2B
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***  EXP_1TME_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000  ***

CA strain for 24021912501950589

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 1GLY 2 -0.0605
GLY 2ASN 3 0.0491
ASN 3GLU 4 -0.3218
GLU 4GLY 5 -0.0507
GLY 5VAL 6 0.3595
VAL 6ILE 7 -0.2442
ILE 7ILE 8 0.0720
ILE 8ASN 9 0.1068
ASN 9ASN 10 -0.0687
ASN 10PHE 11 0.1167
PHE 11TYR 12 0.1758
TYR 12SER 13 -0.0457
SER 13ASN 14 0.0188
ASN 14GLN 15 0.3057
GLN 15TYR 16 -0.0203
TYR 16GLN 17 0.0142
GLN 17ASN 18 0.1637
ASN 18SER 19 0.1492
SER 19ILE 20 -0.1712
ILE 20ASP 21 0.1242
ASP 21LEU 22 0.3152
LEU 22SER 23 -0.0331
SER 23ALA 24 -0.0214
ALA 24SER 25 0.0567

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.