CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  EXP_5T5S_unrelaxed_rank_001_alphafold2_ptm_model_5_seed_000  ***

CA strain for 24021912430841891

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 0.0000
GLU 2ALA 3 -0.0063
ALA 3GLN 4 0.0003
GLN 4LYS 5 0.0224
LYS 5ALA 6 0.0000
ALA 6LEU 7 0.0845
LEU 7ARG 8 0.0001
ARG 8LYS 9 0.3254
LYS 9ALA 10 -0.0000
ALA 10GLU 11 -0.0030
GLU 11SER 12 0.0002
SER 12LEU 13 0.0986
LEU 13LYS 14 0.0003
LYS 14LYS 15 0.2346
LYS 15CYS 16 0.0000
CYS 16LEU 17 -0.0000
LEU 17SER 18 0.0002
SER 18VAL 19 0.1599
VAL 19MET 20 -0.0001
MET 20GLU 21 -0.0228
GLU 21ALA 22 0.0003
ALA 22LYS 23 0.1207
LYS 23VAL 24 0.0000
VAL 24LYS 25 0.0222
LYS 25ALA 26 0.0003
ALA 26GLN 27 0.0380
GLN 27THR 28 0.0002
THR 28ALA 29 0.0833
ALA 29PRO 30 0.0002
PRO 30ASN 31 -0.1783
ASN 31LYS 32 -0.0000
LYS 32ASP 33 -0.1210
ASP 33VAL 34 -0.0001
VAL 34GLN 35 -0.0575
GLN 35ARG 36 -0.0002
ARG 36GLU 37 0.1306
GLU 37ILE 38 0.0001
ILE 38ALA 39 -0.0251
ALA 39ASP 40 0.0002
ASP 40LEU 41 0.1235
LEU 41GLY 42 0.0001
GLY 42GLU 43 0.1368
GLU 43ALA 44 -0.0004
ALA 44LEU 45 0.0094
LEU 45ALA 46 0.0003
ALA 46THR 47 0.0721
THR 47ALA 48 0.0000
ALA 48VAL 49 0.2376
VAL 49ILE 50 -0.0004
ILE 50PRO 51 -0.0272
PRO 51GLN 52 0.0001
GLN 52TRP 53 -0.0512
TRP 53GLN 54 0.0000
GLN 54LYS 55 -0.1100
LYS 55ASP 56 -0.0002
ASP 56GLU 57 0.0640
GLU 57LEU 58 0.0002
LEU 58ARG 59 -0.1437
ARG 59GLU 60 -0.0001
GLU 60THR 61 0.2626
THR 61LEU 62 -0.0001
LEU 62LYS 63 -0.0202
LYS 63SER 64 0.0001
SER 64LEU 65 0.1025
LEU 65LYS 66 0.0000
LYS 66LYS 67 0.1149
LYS 67VAL 68 -0.0003
VAL 68MET 69 -0.0274
MET 69ASP 70 0.0002
ASP 70ASP 71 -0.0740
ASP 71LEU 72 -0.0003
LEU 72ASP 73 0.1513
ASP 73ARG 74 0.0004
ARG 74ALA 75 -0.2282
ALA 75SER 76 0.0003
SER 76LYS 77 0.1873
LYS 77ALA 78 -0.0000
ALA 78ASP 79 -0.0045
ASP 79VAL 80 0.0001
VAL 80GLN 81 -0.0417
GLN 81LYS 82 0.0000
LYS 82ARG 83 0.0832
ARG 83VAL 84 0.0002
VAL 84LEU 85 -0.0222
LEU 85GLU 86 0.0000
GLU 86LYS 87 -0.0743
LYS 87THR 88 -0.0000
THR 88LYS 89 0.0492
LYS 89GLN 90 -0.0002
GLN 90PHE 91 -0.0958
PHE 91ILE 92 0.0001
ILE 92ASP 93 0.0226
ASP 93SER 94 0.0001
SER 94ASN 95 -0.0346
ASN 95PRO 96 -0.0000
PRO 96ASN 97 -0.0235
ASN 97GLN 98 0.0000
GLN 98PRO 99 -0.0964
PRO 99LEU 100 0.0001
LEU 100VAL 101 0.0037
VAL 101ILE 102 0.0002
ILE 102LEU 103 -0.0008
LEU 103GLU 104 0.0001
GLU 104MET 105 -0.0662
MET 105GLU 106 0.0001
GLU 106SER 107 -0.0061
SER 107GLY 108 -0.0001
GLY 108ALA 109 -0.0962
ALA 109THR 110 0.0001
THR 110ALA 111 0.3762
ALA 111LYS 112 -0.0002
LYS 112ALA 113 0.0311
ALA 113LEU 114 -0.0004
LEU 114ASN 115 -0.0577
ASN 115GLU 116 -0.0001
GLU 116ALA 117 -0.0063
ALA 117LEU 118 -0.0001
LEU 118LYS 119 -0.0196
LYS 119LEU 120 -0.0001
LEU 120PHE 121 -0.0444
PHE 121LYS 122 -0.0001
LYS 122MET 123 0.0357
MET 123HIS 124 0.0001
HIS 124SER 125 -0.0268
SER 125PRO 126 0.0001
PRO 126GLN 127 0.0027
GLN 127THR 128 -0.0001
THR 128SER 129 -0.0137
SER 129ALA 130 0.0001
ALA 130MET 131 -0.0007
MET 131LEU 132 -0.0002
LEU 132PHE 133 -0.0306
PHE 133THR 134 0.0000
THR 134VAL 135 -0.0551
VAL 135ASP 136 0.0001
ASP 136ASN 137 -0.0316
ASN 137GLU 138 -0.0001
GLU 138ALA 139 0.0702
ALA 139GLY 140 0.0001
GLY 140LYS 141 -0.0170
LYS 141ILE 142 -0.0003
ILE 142THR 143 -0.0578
THR 143CYS 144 -0.0002
CYS 144LEU 145 -0.0516
LEU 145CYS 146 0.0001
CYS 146GLN 147 -0.0352
GLN 147VAL 148 -0.0001
VAL 148PRO 149 -0.0019
PRO 149GLN 150 -0.0001
GLN 150ASN 151 -0.0110
ASN 151ALA 152 -0.0001
ALA 152ALA 153 -0.0218
ALA 153ASN 154 0.0001
ASN 154ARG 155 0.0075
ARG 155GLY 156 0.0001
GLY 156LEU 157 0.0049
LEU 157LYS 158 0.0003
LYS 158ALA 159 0.0253
ALA 159SER 160 0.0000
SER 160GLU 161 0.0169
GLU 161TRP 162 0.0002
TRP 162VAL 163 0.0137
VAL 163GLN 164 -0.0001
GLN 164GLN 165 -0.0184
GLN 165VAL 166 0.0001
VAL 166SER 167 -0.0190
SER 167GLY 168 0.0000
GLY 168LEU 169 -0.0447
LEU 169MET 170 -0.0000
MET 170ASP 171 -0.0234
ASP 171GLY 172 -0.0002
GLY 172LYS 173 -0.0316
LYS 173GLY 174 0.0002
GLY 174GLY 175 -0.1155
GLY 175GLY 176 0.0003
GLY 176LYS 177 -0.0494
LYS 177ASP 178 0.0000
ASP 178VAL 179 0.0330
VAL 179SER 180 0.0004
SER 180ALA 181 -0.0752
ALA 181GLN 182 0.0001
GLN 182ALA 183 -0.0686
ALA 183THR 184 -0.0000
THR 184GLY 185 -0.0455
GLY 185LYS 186 0.0000
LYS 186ASN 187 -0.0131
ASN 187VAL 188 0.0001
VAL 188GLY 189 0.0865
GLY 189CYS 190 -0.0000
CYS 190LEU 191 -0.0599
LEU 191GLN 192 -0.0005
GLN 192GLU 193 -0.0325
GLU 193ALA 194 0.0001
ALA 194LEU 195 -0.0283
LEU 195GLN 196 -0.0002
GLN 196LEU 197 -0.0400
LEU 197ALA 198 0.0001
ALA 198THR 199 0.0027
THR 199SER 200 -0.0001
SER 200PHE 201 -0.0166
PHE 201ALA 202 0.0002
ALA 202GLN 203 -0.0091
GLN 203LEU 204 0.0004
LEU 204ARG 205 0.0049
ARG 205LEU 206 -0.0001
LEU 206GLY 207 -0.0349

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.