CNRS Nantes University US2B US2B
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***  EXP_1P5V_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000  ***

CA strain for 24021912381935461

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1GLU 2 -0.0249
GLU 2PRO 3 -0.1652
PRO 3ALA 4 -0.2365
ALA 4ARG 5 -0.2416
ARG 5ILE 6 0.2930
ILE 6THR 7 -0.0038
THR 7LEU 8 0.2379
LEU 8THR 9 0.0591
THR 9TYR 10 0.0553
TYR 10LYS 11 -0.0508
LYS 11GLU 12 0.0554
GLU 12GLY 13 0.0707
GLY 13ALA 14 -0.0745
ALA 14PRO 15 0.2255
PRO 15ILE 16 -0.1100
ILE 16THR 17 0.0680
THR 17ILE 18 -0.0278
ILE 18MET 19 0.1464
MET 19ASP 20 -0.1552
ASP 20ASN 21 0.0301
ASN 21GLY 22 0.2096
GLY 22ASN 23 0.0577
ASN 23ILE 24 0.0224
ILE 24ASP 25 0.1142
ASP 25THR 26 -0.1816
THR 26GLU 27 0.1243
GLU 27LEU 28 0.0265
LEU 28LEU 29 0.0148
LEU 29VAL 30 0.0510
VAL 30GLY 31 0.0235
GLY 31THR 32 0.0925
THR 32LEU 33 0.0338
LEU 33THR 34 0.0939
THR 34LEU 35 0.0833
LEU 35GLY 36 0.0099
GLY 36GLY 37 0.0181
GLY 37TYR 38 0.0388
TYR 38LYS 39 0.0108
LYS 39THR 40 -0.1035
THR 40GLY 41 -0.0575
GLY 41THR 42 -0.0284
THR 42THR 43 -0.0088
THR 43SER 44 0.0539
SER 44THR 45 -0.0363
THR 45SER 46 0.1400
SER 46VAL 47 -0.0356
VAL 47ASN 48 -0.1204
ASN 48PHE 49 -0.1013
PHE 49THR 50 0.0135
THR 50ASP 51 -0.0961
ASP 51ALA 52 0.0423
ALA 52ALA 53 0.0556
ALA 53GLY 54 0.0606
GLY 54ASP 55 -0.0282
ASP 55PRO 56 0.0059
PRO 56MET 57 -0.0111
MET 57TYR 58 0.0517
TYR 58LEU 59 0.0558
LEU 59THR 60 0.1519
THR 60PHE 61 0.0419
PHE 61THR 62 0.2223
THR 62SER 63 0.0668
SER 63GLN 64 -0.0631
GLN 64ASP 65 -0.0402
ASP 65GLY 66 0.1435
GLY 66ASN 67 -0.0340
ASN 67ASN 68 0.0616
ASN 68HIS 69 -0.0658
HIS 69GLN 70 0.1371
GLN 70PHE 71 -0.0269
PHE 71THR 72 0.1533
THR 72THR 73 0.1361
THR 73LYS 74 0.1787
LYS 74VAL 75 0.1283
VAL 75ILE 76 0.2580
ILE 76GLY 77 0.0825
GLY 77LYS 78 0.0132
LYS 78ASP 79 0.0316
ASP 79SER 80 0.1650
SER 80ARG 81 -0.2582
ARG 81ASP 82 0.1187
ASP 82PHE 83 -0.0634
PHE 83ASP 84 0.3677
ASP 84ILE 85 0.0536
ILE 85SER 86 0.0344
SER 86PRO 87 0.0483
PRO 87LYS 88 -0.0250
LYS 88VAL 89 -0.0635
VAL 89ASN 90 -0.0152
ASN 90GLY 91 -0.0919
GLY 91GLU 92 0.0562
GLU 92ASN 93 -0.0110
ASN 93LEU 94 -0.0580
LEU 94VAL 95 0.0640
VAL 95GLY 96 0.0066
GLY 96ASP 97 0.0871
ASP 97ASP 98 0.0950
ASP 98VAL 99 0.0004
VAL 99VAL 100 -0.1068
VAL 100LEU 101 0.0533
LEU 101ALA 102 -0.0651
ALA 102THR 103 -0.1397
THR 103GLY 104 -0.0508
GLY 104SER 105 0.2126
SER 105GLN 106 -0.1283
GLN 106ASP 107 0.2511
ASP 107PHE 108 0.0457
PHE 108PHE 109 0.1527
PHE 109VAL 110 0.1748
VAL 110ARG 111 0.0172
ARG 111SER 112 0.1691
SER 112ILE 113 0.0299
ILE 113GLY 114 -0.1062
GLY 114SER 115 0.1987
SER 115LYS 116 -0.1531
LYS 116GLY 117 0.0511
GLY 117GLY 118 0.1314
GLY 118LYS 119 0.1166
LYS 119LEU 120 0.1296
LEU 120ALA 121 -0.0608
ALA 121ALA 122 -0.0621
ALA 122GLY 123 0.0956
GLY 123LYS 124 0.0207
LYS 124TYR 125 0.0369
TYR 125THR 126 -0.0453
THR 126ASP 127 -0.3381
ASP 127ALA 128 -0.0783
ALA 128VAL 129 0.1410
VAL 129THR 130 -0.2307
THR 130VAL 131 0.0273
VAL 131THR 132 -0.1162
THR 132VAL 133 -0.1882
VAL 133SER 134 0.0608
SER 134ASN 135 -0.1729
ASN 135GLN 136 -0.0106

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.