CNRS Nantes University US2B US2B
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***  EXP_1P5V_unrelaxed_rank_001_alphafold2_ptm_model_1_seed_000  ***

CA strain for 24021912381935461

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
VAL 1GLU 2 -0.0209
GLU 2PRO 3 -0.1921
PRO 3ALA 4 0.1707
ALA 4ARG 5 0.3667
ARG 5ILE 6 0.0523
ILE 6THR 7 0.1216
THR 7LEU 8 -0.1456
LEU 8THR 9 0.0570
THR 9TYR 10 0.0860
TYR 10LYS 11 -0.0092
LYS 11GLU 12 0.2041
GLU 12GLY 13 0.0285
GLY 13ALA 14 0.0941
ALA 14PRO 15 0.1874
PRO 15ILE 16 -0.0304
ILE 16THR 17 0.1573
THR 17ILE 18 -0.0025
ILE 18MET 19 -0.0817
MET 19ASP 20 0.1119
ASP 20ASN 21 -0.0821
ASN 21GLY 22 -0.0176
GLY 22ASN 23 0.0121
ASN 23ILE 24 0.0947
ILE 24ASP 25 -0.0040
ASP 25THR 26 -0.0397
THR 26GLU 27 0.0369
GLU 27LEU 28 -0.0032
LEU 28LEU 29 0.2321
LEU 29VAL 30 -0.0888
VAL 30GLY 31 0.2111
GLY 31THR 32 0.1923
THR 32LEU 33 0.1112
LEU 33THR 34 0.0289
THR 34LEU 35 0.1812
LEU 35GLY 36 -0.0604
GLY 36GLY 37 -0.0571
GLY 37TYR 38 0.0402
TYR 38LYS 39 0.0843
LYS 39THR 40 -0.0598
THR 40GLY 41 -0.0756
GLY 41THR 42 -0.0862
THR 42THR 43 0.0562
THR 43SER 44 0.0030
SER 44THR 45 -0.0140
THR 45SER 46 0.1583
SER 46VAL 47 0.0297
VAL 47ASN 48 -0.1095
ASN 48PHE 49 -0.0379
PHE 49THR 50 -0.0292
THR 50ASP 51 -0.0765
ASP 51ALA 52 -0.0631
ALA 52ALA 53 -0.0528
ALA 53GLY 54 -0.1650
GLY 54ASP 55 0.0022
ASP 55PRO 56 -0.0337
PRO 56MET 57 0.0779
MET 57TYR 58 -0.1172
TYR 58LEU 59 -0.0048
LEU 59THR 60 -0.0507
THR 60PHE 61 -0.0463
PHE 61THR 62 -0.0578
THR 62SER 63 -0.0302
SER 63GLN 64 0.0314
GLN 64ASP 65 0.0353
ASP 65GLY 66 -0.0344
GLY 66ASN 67 0.0180
ASN 67ASN 68 -0.0469
ASN 68HIS 69 0.0565
HIS 69GLN 70 -0.0690
GLN 70PHE 71 0.1217
PHE 71THR 72 -0.1060
THR 72THR 73 -0.0274
THR 73LYS 74 0.0060
LYS 74VAL 75 -0.0972
VAL 75ILE 76 0.0818
ILE 76GLY 77 -0.0325
GLY 77LYS 78 -0.0093
LYS 78ASP 79 0.0906
ASP 79SER 80 0.0361
SER 80ARG 81 -0.0672
ARG 81ASP 82 0.0516
ASP 82PHE 83 0.0151
PHE 83ASP 84 0.0962
ASP 84ILE 85 0.0386
ILE 85SER 86 0.0563
SER 86PRO 87 0.0372
PRO 87LYS 88 0.0202
LYS 88VAL 89 -0.1323
VAL 89ASN 90 0.0462
ASN 90GLY 91 0.0185
GLY 91GLU 92 0.0581
GLU 92ASN 93 0.0663
ASN 93LEU 94 -0.0817
LEU 94VAL 95 -0.0751
VAL 95GLY 96 -0.0119
GLY 96ASP 97 0.0060
ASP 97ASP 98 0.0922
ASP 98VAL 99 -0.0010
VAL 99VAL 100 -0.0234
VAL 100LEU 101 0.0136
LEU 101ALA 102 -0.0687
ALA 102THR 103 -0.0005
THR 103GLY 104 -0.0279
GLY 104SER 105 0.1260
SER 105GLN 106 -0.0835
GLN 106ASP 107 0.1849
ASP 107PHE 108 0.0214
PHE 108PHE 109 0.1856
PHE 109VAL 110 0.0203
VAL 110ARG 111 -0.0173
ARG 111SER 112 0.0943
SER 112ILE 113 0.0435
ILE 113GLY 114 -0.1987
GLY 114SER 115 0.0825
SER 115LYS 116 -0.3151
LYS 116GLY 117 0.1188
GLY 117GLY 118 -0.2316
GLY 118LYS 119 -0.0616
LYS 119LEU 120 -0.0593
LEU 120ALA 121 0.0969
ALA 121ALA 122 -0.0059
ALA 122GLY 123 0.0735
GLY 123LYS 124 0.1763
LYS 124TYR 125 -0.0555
TYR 125THR 126 0.1334
THR 126ASP 127 0.3050
ASP 127ALA 128 0.0078
ALA 128VAL 129 -0.0463
VAL 129THR 130 0.0288
THR 130VAL 131 -0.0546
VAL 131THR 132 0.0112
THR 132VAL 133 -0.1208
VAL 133SER 134 -0.0077
SER 134ASN 135 -0.1364
ASN 135GLN 136 0.4388

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.