This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
GLN 2
-0.0030
GLN 2
LEU 3
-0.0736
LEU 3
THR 4
-0.1806
THR 4
GLU 5
-0.0351
GLU 5
GLU 6
0.0373
GLU 6
GLN 7
-0.1100
GLN 7
ILE 8
0.0218
ILE 8
ALA 9
-0.0804
ALA 9
GLU 10
-0.0485
GLU 10
PHE 11
-0.0020
PHE 11
LYS 12
0.0691
LYS 12
GLU 13
-0.0056
GLU 13
ALA 14
-0.1068
ALA 14
PHE 15
0.0814
PHE 15
SER 16
-0.0045
SER 16
LEU 17
-0.0365
LEU 17
PHE 18
0.0301
PHE 18
ASP 19
-0.0468
ASP 19
LYS 20
-0.0086
LYS 20
ASP 21
-0.0263
ASP 21
GLY 22
0.0439
GLY 22
ASP 23
0.0023
ASP 23
GLY 24
0.0212
GLY 24
THR 25
0.0427
THR 25
ILE 26
-0.0172
ILE 26
THR 27
0.0217
THR 27
THR 28
0.1068
THR 28
LYS 29
-0.0589
LYS 29
GLU 30
0.0323
GLU 30
LEU 31
0.0843
LEU 31
GLY 32
-0.0277
GLY 32
THR 33
0.0027
THR 33
VAL 34
-0.0390
VAL 34
MET 35
-0.0817
MET 35
ARG 36
0.0003
ARG 36
SER 37
-0.0033
SER 37
LEU 38
-0.0189
LEU 38
GLY 39
-0.0493
GLY 39
GLN 40
0.0259
GLN 40
ASN 41
-0.0044
ASN 41
PRO 42
0.0251
PRO 42
THR 43
0.0179
THR 43
GLU 44
0.1010
GLU 44
ALA 45
-0.0439
ALA 45
GLU 46
0.0158
GLU 46
LEU 47
0.0151
LEU 47
GLN 48
0.0617
GLN 48
ASP 49
-0.0276
ASP 49
MET 50
0.0373
MET 50
ILE 51
0.0498
ILE 51
ASN 52
0.0138
ASN 52
GLU 53
-0.0651
GLU 53
VAL 54
-0.0320
VAL 54
ASP 55
-0.0933
ASP 55
ALA 56
0.0284
ALA 56
ASP 57
-0.0135
ASP 57
GLY 58
0.0462
GLY 58
ASN 59
-0.0097
ASN 59
GLY 60
0.0560
GLY 60
THR 61
0.0349
THR 61
ILE 62
-0.0224
ILE 62
ASP 63
-0.0039
ASP 63
PHE 64
0.1290
PHE 64
PRO 65
-0.0074
PRO 65
GLU 66
-0.0073
GLU 66
PHE 67
0.0479
PHE 67
LEU 68
-0.0903
LEU 68
THR 69
0.0014
THR 69
MET 70
-0.0106
MET 70
MET 71
-0.1055
MET 71
ALA 72
0.0800
ALA 72
ARG 73
0.0168
ARG 73
LYS 74
-0.0529
LYS 74
MET 75
-0.0642
MET 75
LYS 76
0.1389
LYS 76
ASP 77
-0.0027
ASP 77
THR 78
-0.0618
THR 78
ASP 79
0.0383
ASP 79
SER 80
0.0118
SER 80
GLU 81
0.1257
GLU 81
GLU 82
-0.0287
GLU 82
GLU 83
0.0046
GLU 83
ILE 84
0.0740
ILE 84
ARG 85
-0.0203
ARG 85
GLU 86
0.0071
GLU 86
ALA 87
0.0753
ALA 87
PHE 88
-0.0249
PHE 88
ARG 89
0.0037
ARG 89
VAL 90
0.0599
VAL 90
PHE 91
0.0008
PHE 91
ASP 92
0.0570
ASP 92
LYS 93
-0.0003
LYS 93
ASP 94
0.0647
ASP 94
GLY 95
-0.0551
GLY 95
ASN 96
-0.0092
ASN 96
GLY 97
-0.0055
GLY 97
TYR 98
-0.0281
TYR 98
ILE 99
-0.0115
ILE 99
SER 100
0.0074
SER 100
ALA 101
-0.1788
ALA 101
ALA 102
0.0622
ALA 102
GLU 103
-0.1321
GLU 103
LEU 104
-0.0110
LEU 104
ARG 105
0.0345
ARG 105
HIS 106
-0.0281
HIS 106
VAL 107
-0.0333
VAL 107
MET 108
0.0880
MET 108
THR 109
-0.0331
THR 109
ASN 110
0.0006
ASN 110
LEU 111
0.0335
LEU 111
GLY 112
-0.0091
GLY 112
GLU 113
-0.0264
GLU 113
LYS 114
0.0483
LYS 114
LEU 115
-0.0173
LEU 115
THR 116
0.0869
THR 116
ASP 117
0.0026
ASP 117
GLU 118
-0.0128
GLU 118
GLU 119
-0.0118
GLU 119
VAL 120
-0.0193
VAL 120
ASP 121
0.0127
ASP 121
GLU 122
-0.0106
GLU 122
MET 123
0.0322
MET 123
ILE 124
-0.0950
ILE 124
ARG 125
0.0265
ARG 125
GLU 126
-0.0048
GLU 126
ALA 127
0.0956
ALA 127
ASP 128
0.0764
ASP 128
ILE 129
-0.0358
ILE 129
ASP 130
0.0218
ASP 130
GLY 131
-0.0290
GLY 131
ASP 132
0.0119
ASP 132
GLY 133
-0.0588
GLY 133
GLN 134
-0.0347
GLN 134
VAL 135
0.0346
VAL 135
ASN 136
-0.0082
ASN 136
TYR 137
-0.0716
TYR 137
GLU 138
0.0182
GLU 138
GLU 139
0.0254
GLU 139
PHE 140
-0.0429
PHE 140
VAL 141
0.0027
VAL 141
GLN 142
0.0352
GLN 142
MET 143
0.0040
MET 143
MET 144
0.1188
MET 144
THR 145
-0.0131
THR 145
ALA 146
-0.0117
ALA 146
LYS 147
-0.0826
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.