CNRS Nantes University US2B US2B
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***  EXP_1RY2_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912181314425

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1PRO 2 -0.3221
PRO 2GLY 3 0.4426
GLY 3ILE 4 -0.4988
ILE 4VAL 5 0.0815
VAL 5ARG 6 0.0782
ARG 6HIS 7 -0.0728
HIS 7LEU 8 0.0575
LEU 8ILE 9 0.3894
ILE 9ASP 10 -0.2006
ASP 10SER 11 0.0532
SER 11VAL 12 0.2006
VAL 12LYS 13 -0.3476
LYS 13LEU 14 0.2849

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.