CNRS Nantes University US2B US2B
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***  EXP_1RY2_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000  ***

CA strain for 24021912181314425

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1PRO 2 0.2010
PRO 2GLY 3 0.3138
GLY 3ILE 4 -0.5801
ILE 4VAL 5 0.1513
VAL 5ARG 6 0.2954
ARG 6HIS 7 0.2787
HIS 7LEU 8 0.1851
LEU 8ILE 9 -0.0163
ILE 9ASP 10 -0.3716
ASP 10SER 11 1.0520
SER 11VAL 12 -0.3423
VAL 12LYS 13 0.0863
LYS 13LEU 14 0.0561

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.