This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
1.0521
VAL 2
PHE 3
0.6152
PHE 3
GLY 4
0.8482
GLY 4
ARG 5
1.1275
ARG 5
CYS 6
0.8045
CYS 6
GLU 7
1.1480
GLU 7
LEU 8
1.1385
LEU 8
ALA 9
1.0321
ALA 9
ALA 10
0.5605
ALA 10
ALA 11
0.8460
ALA 11
MET 12
0.9215
MET 12
LYS 13
0.6659
LYS 13
ARG 14
0.8152
ARG 14
HIS 15
1.1560
HIS 15
GLY 16
0.2857
GLY 16
LEU 17
0.2963
LEU 17
ASP 18
0.9036
ASP 18
ASN 19
1.2534
ASN 19
TYR 20
0.9374
TYR 20
ARG 21
1.2412
ARG 21
GLY 22
0.8764
GLY 22
TYR 23
1.3503
TYR 23
SER 24
1.0199
SER 24
LEU 25
0.8432
LEU 25
GLY 26
0.3814
GLY 26
ASN 27
1.0203
ASN 27
TRP 28
0.9456
TRP 28
VAL 29
0.8452
VAL 29
CYS 30
1.0426
CYS 30
ALA 31
0.7599
ALA 31
ALA 32
0.7288
ALA 32
LYS 33
0.4556
LYS 33
PHE 34
0.7292
PHE 34
GLU 35
0.9097
GLU 35
SER 36
0.3075
SER 36
ASN 37
1.0769
ASN 37
PHE 38
0.6712
PHE 38
ASN 39
1.0013
ASN 39
THR 40
1.1567
THR 40
GLN 41
0.6587
GLN 41
ALA 42
0.9596
ALA 42
THR 43
0.6111
THR 43
ASN 44
0.8031
ASN 44
ARG 45
0.9817
ARG 45
ASN 46
0.3212
ASN 46
THR 47
1.6363
THR 47
ASP 48
1.6983
ASP 48
GLY 49
1.5259
GLY 49
SER 50
0.1574
SER 50
THR 51
-0.3254
THR 51
ASP 52
-0.2365
ASP 52
TYR 53
0.6803
TYR 53
GLY 54
-0.4326
GLY 54
ILE 55
1.0172
ILE 55
LEU 56
0.5195
LEU 56
GLN 57
0.5746
GLN 57
ILE 58
0.7755
ILE 58
ASN 59
-0.0141
ASN 59
SER 60
0.5888
SER 60
ARG 61
0.4377
ARG 61
TRP 62
0.5213
TRP 62
TRP 63
-0.3501
TRP 63
CYS 64
0.9402
CYS 64
ASN 65
1.0325
ASN 65
ASP 66
0.5544
ASP 66
GLY 67
1.1632
GLY 67
ARG 68
1.6449
ARG 68
THR 69
0.9620
THR 69
PRO 70
1.1853
PRO 70
GLY 71
-0.2390
GLY 71
SER 72
1.4718
SER 72
ARG 73
0.6696
ARG 73
ASN 74
1.4311
ASN 74
LEU 75
1.0738
LEU 75
CYS 76
0.9442
CYS 76
ASN 77
1.5956
ASN 77
ILE 78
1.5719
ILE 78
PRO 79
1.3125
PRO 79
CYS 80
1.2535
CYS 80
SER 81
0.9891
SER 81
ALA 82
0.8792
ALA 82
LEU 83
1.0508
LEU 83
LEU 84
0.7781
LEU 84
SER 85
-0.3986
SER 85
SER 86
-0.4643
SER 86
ASP 87
0.8484
ASP 87
ILE 88
1.3626
ILE 88
THR 89
-0.8993
THR 89
ALA 90
0.3288
ALA 90
SER 91
0.5306
SER 91
VAL 92
0.9496
VAL 92
ASN 93
-0.1064
ASN 93
CYS 94
0.1895
CYS 94
ALA 95
0.7749
ALA 95
LYS 96
-0.2754
LYS 96
LYS 97
0.7803
LYS 97
ILE 98
0.7786
ILE 98
VAL 99
-0.2029
VAL 99
SER 100
1.1088
SER 100
ASP 101
0.9501
ASP 101
GLY 102
1.4026
GLY 102
ASN 103
1.6435
ASN 103
GLY 104
1.2699
GLY 104
MET 105
0.4693
MET 105
ASN 106
1.1144
ASN 106
ALA 107
0.5488
ALA 107
TRP 108
0.6356
TRP 108
VAL 109
1.2627
VAL 109
ALA 110
0.9854
ALA 110
TRP 111
0.7409
TRP 111
ARG 112
1.3453
ARG 112
ASN 113
0.3602
ASN 113
ARG 114
1.2573
ARG 114
CYS 115
1.0987
CYS 115
LYS 116
1.1385
LYS 116
GLY 117
1.8008
GLY 117
THR 118
1.8336
THR 118
ASP 119
1.6193
ASP 119
VAL 120
1.5704
VAL 120
GLN 121
1.3963
GLN 121
ALA 122
1.0464
ALA 122
TRP 123
0.3304
TRP 123
ILE 124
1.0696
ILE 124
ARG 125
1.1790
ARG 125
GLY 126
1.4309
GLY 126
CYS 127
0.8047
CYS 127
ARG 128
1.1513
ARG 128
LEU 129
1.0477
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.