This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.5055
VAL 2
PHE 3
0.8569
PHE 3
GLY 4
0.3529
GLY 4
ARG 5
0.9876
ARG 5
CYS 6
0.9675
CYS 6
GLU 7
0.8019
GLU 7
LEU 8
0.6990
LEU 8
ALA 9
0.4901
ALA 9
ALA 10
-0.0213
ALA 10
ALA 11
0.5094
ALA 11
MET 12
0.5343
MET 12
LYS 13
0.0995
LYS 13
ARG 14
0.2274
ARG 14
HIS 15
0.4761
HIS 15
GLY 16
0.8388
GLY 16
LEU 17
0.6510
LEU 17
ASP 18
0.7038
ASP 18
ASN 19
1.2389
ASN 19
TYR 20
1.0715
TYR 20
ARG 21
1.0213
ARG 21
GLY 22
1.0964
GLY 22
TYR 23
1.2557
TYR 23
SER 24
0.6861
SER 24
LEU 25
0.9149
LEU 25
GLY 26
0.2923
GLY 26
ASN 27
0.6901
ASN 27
TRP 28
0.7051
TRP 28
VAL 29
0.2884
VAL 29
CYS 30
-0.5330
CYS 30
ALA 31
0.8757
ALA 31
ALA 32
-0.5891
ALA 32
LYS 33
0.2622
LYS 33
PHE 34
0.3146
PHE 34
GLU 35
0.7361
GLU 35
SER 36
-0.0632
SER 36
ASN 37
0.7633
ASN 37
PHE 38
0.6785
PHE 38
ASN 39
0.5225
ASN 39
THR 40
0.7719
THR 40
GLN 41
0.3878
GLN 41
ALA 42
-0.0134
ALA 42
THR 43
-0.1585
THR 43
ASN 44
0.8662
ASN 44
ARG 45
0.8996
ARG 45
ASN 46
1.1886
ASN 46
THR 47
1.3039
THR 47
ASP 48
1.5442
ASP 48
GLY 49
1.3438
GLY 49
SER 50
0.7792
SER 50
THR 51
0.6955
THR 51
ASP 52
0.8991
ASP 52
TYR 53
0.6304
TYR 53
GLY 54
0.6054
GLY 54
ILE 55
0.7755
ILE 55
LEU 56
-0.0859
LEU 56
GLN 57
0.6914
GLN 57
ILE 58
0.9859
ILE 58
ASN 59
1.0053
ASN 59
SER 60
0.5568
SER 60
ARG 61
0.9208
ARG 61
TRP 62
1.0336
TRP 62
TRP 63
1.3786
TRP 63
CYS 64
0.8244
CYS 64
ASN 65
0.8822
ASN 65
ASP 66
0.8415
ASP 66
GLY 67
1.0981
GLY 67
ARG 68
0.6410
ARG 68
THR 69
1.4614
THR 69
PRO 70
1.0889
PRO 70
GLY 71
1.6215
GLY 71
SER 72
0.9523
SER 72
ARG 73
1.4396
ARG 73
ASN 74
1.5888
ASN 74
LEU 75
1.0573
LEU 75
CYS 76
0.8775
CYS 76
ASN 77
1.3436
ASN 77
ILE 78
1.1479
ILE 78
PRO 79
0.6064
PRO 79
CYS 80
0.5934
CYS 80
SER 81
0.6878
SER 81
ALA 82
0.6709
ALA 82
LEU 83
0.1384
LEU 83
LEU 84
0.6555
LEU 84
SER 85
0.8422
SER 85
SER 86
0.9580
SER 86
ASP 87
0.8754
ASP 87
ILE 88
0.6616
ILE 88
THR 89
0.6945
THR 89
ALA 90
1.2113
ALA 90
SER 91
0.4454
SER 91
VAL 92
0.9525
VAL 92
ASN 93
0.6409
ASN 93
CYS 94
0.9865
CYS 94
ALA 95
0.9591
ALA 95
LYS 96
0.6631
LYS 96
LYS 97
1.3010
LYS 97
ILE 98
0.7980
ILE 98
VAL 99
1.0099
VAL 99
SER 100
0.1284
SER 100
ASP 101
1.2571
ASP 101
GLY 102
1.5764
GLY 102
ASN 103
0.1452
ASN 103
GLY 104
1.4566
GLY 104
MET 105
0.9896
MET 105
ASN 106
-0.3277
ASN 106
ALA 107
1.0563
ALA 107
TRP 108
0.8036
TRP 108
VAL 109
0.5495
VAL 109
ALA 110
0.1544
ALA 110
TRP 111
0.6452
TRP 111
ARG 112
-0.3897
ARG 112
ASN 113
0.4499
ASN 113
ARG 114
0.6505
ARG 114
CYS 115
1.0088
CYS 115
LYS 116
-0.2940
LYS 116
GLY 117
1.7031
GLY 117
THR 118
1.6080
THR 118
ASP 119
1.6579
ASP 119
VAL 120
1.3266
VAL 120
GLN 121
1.3483
GLN 121
ALA 122
0.9376
ALA 122
TRP 123
1.5090
TRP 123
ILE 124
1.0160
ILE 124
ARG 125
1.2740
ARG 125
GLY 126
1.3386
GLY 126
CYS 127
0.5013
CYS 127
ARG 128
1.2175
ARG 128
LEU 129
1.3025
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.