This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1500
VAL 2
PHE 3
0.9538
PHE 3
GLY 4
0.4906
GLY 4
ARG 5
1.0278
ARG 5
CYS 6
0.5334
CYS 6
GLU 7
0.8411
GLU 7
LEU 8
0.4846
LEU 8
ALA 9
0.5979
ALA 9
ALA 10
0.0694
ALA 10
ALA 11
0.4075
ALA 11
MET 12
0.6096
MET 12
LYS 13
0.0572
LYS 13
ARG 14
0.6423
ARG 14
HIS 15
0.2188
HIS 15
GLY 16
0.6189
GLY 16
LEU 17
0.1444
LEU 17
ASP 18
0.3763
ASP 18
ASN 19
0.7337
ASN 19
TYR 20
0.6613
TYR 20
ARG 21
0.4914
ARG 21
GLY 22
0.6290
GLY 22
TYR 23
0.2162
TYR 23
SER 24
0.5522
SER 24
LEU 25
0.6795
LEU 25
GLY 26
0.1454
GLY 26
ASN 27
0.5580
ASN 27
TRP 28
0.6550
TRP 28
VAL 29
0.6887
VAL 29
CYS 30
-0.1105
CYS 30
ALA 31
0.7038
ALA 31
ALA 32
-0.9415
ALA 32
LYS 33
0.6845
LYS 33
PHE 34
0.5281
PHE 34
GLU 35
0.8837
GLU 35
SER 36
0.8854
SER 36
ASN 37
0.9158
ASN 37
PHE 38
-0.2214
PHE 38
ASN 39
0.8648
ASN 39
THR 40
0.1531
THR 40
GLN 41
0.4757
GLN 41
ALA 42
0.8407
ALA 42
THR 43
0.9721
THR 43
ASN 44
0.7549
ASN 44
ARG 45
1.4706
ARG 45
ASN 46
1.3486
ASN 46
THR 47
1.7144
THR 47
ASP 48
1.8025
ASP 48
GLY 49
1.5175
GLY 49
SER 50
1.3784
SER 50
THR 51
1.1347
THR 51
ASP 52
0.6997
ASP 52
TYR 53
0.3977
TYR 53
GLY 54
0.6130
GLY 54
ILE 55
0.7340
ILE 55
LEU 56
0.4869
LEU 56
GLN 57
0.7499
GLN 57
ILE 58
0.8076
ILE 58
ASN 59
0.2468
ASN 59
SER 60
0.7909
SER 60
ARG 61
0.3616
ARG 61
TRP 62
1.4163
TRP 62
TRP 63
0.6881
TRP 63
CYS 64
0.8576
CYS 64
ASN 65
0.8229
ASN 65
ASP 66
0.8672
ASP 66
GLY 67
1.4321
GLY 67
ARG 68
1.0447
ARG 68
THR 69
1.3051
THR 69
PRO 70
1.5297
PRO 70
GLY 71
1.5644
GLY 71
SER 72
1.4077
SER 72
ARG 73
1.4848
ARG 73
ASN 74
0.9684
ASN 74
LEU 75
0.8780
LEU 75
CYS 76
1.0123
CYS 76
ASN 77
1.0528
ASN 77
ILE 78
0.9478
ILE 78
PRO 79
0.9790
PRO 79
CYS 80
0.8959
CYS 80
SER 81
0.8775
SER 81
ALA 82
0.6696
ALA 82
LEU 83
0.7580
LEU 83
LEU 84
0.7347
LEU 84
SER 85
0.7950
SER 85
SER 86
0.7239
SER 86
ASP 87
0.7016
ASP 87
ILE 88
0.8745
ILE 88
THR 89
0.5138
THR 89
ALA 90
0.9701
ALA 90
SER 91
0.5898
SER 91
VAL 92
0.5275
VAL 92
ASN 93
0.6754
ASN 93
CYS 94
0.8728
CYS 94
ALA 95
0.8122
ALA 95
LYS 96
0.1260
LYS 96
LYS 97
1.1431
LYS 97
ILE 98
0.8410
ILE 98
VAL 99
0.9837
VAL 99
SER 100
0.5421
SER 100
ASP 101
1.0913
ASP 101
GLY 102
1.4297
GLY 102
ASN 103
0.9677
ASN 103
GLY 104
1.2068
GLY 104
MET 105
0.6305
MET 105
ASN 106
0.6889
ASN 106
ALA 107
0.9437
ALA 107
TRP 108
0.7425
TRP 108
VAL 109
0.9061
VAL 109
ALA 110
0.2083
ALA 110
TRP 111
0.0765
TRP 111
ARG 112
0.6407
ARG 112
ASN 113
0.7016
ASN 113
ARG 114
0.3926
ARG 114
CYS 115
0.7894
CYS 115
LYS 116
0.5496
LYS 116
GLY 117
1.6987
GLY 117
THR 118
1.5916
THR 118
ASP 119
1.3550
ASP 119
VAL 120
1.1805
VAL 120
GLN 121
0.9422
GLN 121
ALA 122
1.0724
ALA 122
TRP 123
0.9759
TRP 123
ILE 124
0.5980
ILE 124
ARG 125
1.1200
ARG 125
GLY 126
0.7587
GLY 126
CYS 127
1.1658
CYS 127
ARG 128
1.3002
ARG 128
LEU 129
1.4937
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.