CNRS Nantes University US2B US2B
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***  lysozyme2  ***

CA strain for 2402141427352770497

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 0.8265
VAL 2PHE 3 1.1759
PHE 3GLY 4 0.6254
GLY 4ARG 5 0.6193
ARG 5CYS 6 0.5390
CYS 6GLU 7 0.3815
GLU 7LEU 8 0.7589
LEU 8ALA 9 -0.0553
ALA 9ALA 10 0.5632
ALA 10ALA 11 0.1168
ALA 11MET 12 0.7746
MET 12LYS 13 0.2564
LYS 13ARG 14 0.6107
ARG 14HIS 15 0.5257
HIS 15GLY 16 0.9848
GLY 16LEU 17 0.3715
LEU 17ASP 18 -0.0301
ASP 18ASN 19 1.1159
ASN 19TYR 20 0.2785
TYR 20ARG 21 0.8830
ARG 21GLY 22 0.4802
GLY 22TYR 23 0.8038
TYR 23SER 24 1.0371
SER 24LEU 25 0.8483
LEU 25GLY 26 0.3590
GLY 26ASN 27 0.8442
ASN 27TRP 28 0.3258
TRP 28VAL 29 0.5973
VAL 29CYS 30 0.7237
CYS 30ALA 31 -0.2105
ALA 31ALA 32 0.5534
ALA 32LYS 33 0.1526
LYS 33PHE 34 0.5261
PHE 34GLU 35 0.4484
GLU 35SER 36 0.4471
SER 36ASN 37 0.0273
ASN 37PHE 38 0.9225
PHE 38ASN 39 0.9019
ASN 39THR 40 0.2456
THR 40GLN 41 1.0646
GLN 41ALA 42 0.7509
ALA 42THR 43 0.9318
THR 43ASN 44 0.7162
ASN 44ARG 45 0.8668
ARG 45ASN 46 1.3643
ASN 46THR 47 1.7028
THR 47ASP 48 1.5952
ASP 48GLY 49 1.2415
GLY 49SER 50 1.3863
SER 50THR 51 0.9799
THR 51ASP 52 -0.1143
ASP 52TYR 53 0.6152
TYR 53GLY 54 0.8953
GLY 54ILE 55 0.5981
ILE 55LEU 56 0.7439
LEU 56GLN 57 0.5459
GLN 57ILE 58 0.5410
ILE 58ASN 59 0.4240
ASN 59SER 60 0.5237
SER 60ARG 61 0.0987
ARG 61TRP 62 0.0007
TRP 62TRP 63 0.6241
TRP 63CYS 64 0.2584
CYS 64ASN 65 -0.3927
ASN 65ASP 66 0.5060
ASP 66GLY 67 1.0083
GLY 67ARG 68 0.4573
ARG 68THR 69 1.1698
THR 69PRO 70 1.0878
PRO 70GLY 71 1.2858
GLY 71SER 72 -0.4506
SER 72ARG 73 0.1085
ARG 73ASN 74 0.8108
ASN 74LEU 75 0.2117
LEU 75CYS 76 -0.2630
CYS 76ASN 77 1.1303
ASN 77ILE 78 0.9751
ILE 78PRO 79 0.3194
PRO 79CYS 80 0.8399
CYS 80SER 81 1.0329
SER 81ALA 82 0.1219
ALA 82LEU 83 0.5377
LEU 83LEU 84 0.9942
LEU 84SER 85 0.8606
SER 85SER 86 0.7729
SER 86ASP 87 0.9882
ASP 87ILE 88 0.6653
ILE 88THR 89 0.3469
THR 89ALA 90 0.8886
ALA 90SER 91 0.3161
SER 91VAL 92 0.9238
VAL 92ASN 93 0.1461
ASN 93CYS 94 0.2780
CYS 94ALA 95 0.3209
ALA 95LYS 96 0.6024
LYS 96LYS 97 -0.0289
LYS 97ILE 98 0.4712
ILE 98VAL 99 0.7037
VAL 99SER 100 0.4366
SER 100ASP 101 0.3569
ASP 101GLY 102 1.0756
GLY 102ASN 103 1.0650
ASN 103GLY 104 0.8641
GLY 104MET 105 0.6047
MET 105ASN 106 1.0232
ASN 106ALA 107 0.8631
ALA 107TRP 108 0.4333
TRP 108VAL 109 0.9744
VAL 109ALA 110 0.5209
ALA 110TRP 111 0.2997
TRP 111ARG 112 1.0881
ARG 112ASN 113 0.4565
ASN 113ARG 114 0.9136
ARG 114CYS 115 0.4901
CYS 115LYS 116 0.9515
LYS 116GLY 117 0.8724
GLY 117THR 118 1.2294
THR 118ASP 119 0.9648
ASP 119VAL 120 -0.3434
VAL 120GLN 121 0.9463
GLN 121ALA 122 -0.3378
ALA 122TRP 123 -0.3401
TRP 123ILE 124 0.6917
ILE 124ARG 125 -0.0697
ARG 125GLY 126 1.2793
GLY 126CYS 127 0.1860
CYS 127ARG 128 1.3685
ARG 128LEU 129 1.4730

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.