This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.8265
VAL 2
PHE 3
1.1759
PHE 3
GLY 4
0.6254
GLY 4
ARG 5
0.6193
ARG 5
CYS 6
0.5390
CYS 6
GLU 7
0.3815
GLU 7
LEU 8
0.7589
LEU 8
ALA 9
-0.0553
ALA 9
ALA 10
0.5632
ALA 10
ALA 11
0.1168
ALA 11
MET 12
0.7746
MET 12
LYS 13
0.2564
LYS 13
ARG 14
0.6107
ARG 14
HIS 15
0.5257
HIS 15
GLY 16
0.9848
GLY 16
LEU 17
0.3715
LEU 17
ASP 18
-0.0301
ASP 18
ASN 19
1.1159
ASN 19
TYR 20
0.2785
TYR 20
ARG 21
0.8830
ARG 21
GLY 22
0.4802
GLY 22
TYR 23
0.8038
TYR 23
SER 24
1.0371
SER 24
LEU 25
0.8483
LEU 25
GLY 26
0.3590
GLY 26
ASN 27
0.8442
ASN 27
TRP 28
0.3258
TRP 28
VAL 29
0.5973
VAL 29
CYS 30
0.7237
CYS 30
ALA 31
-0.2105
ALA 31
ALA 32
0.5534
ALA 32
LYS 33
0.1526
LYS 33
PHE 34
0.5261
PHE 34
GLU 35
0.4484
GLU 35
SER 36
0.4471
SER 36
ASN 37
0.0273
ASN 37
PHE 38
0.9225
PHE 38
ASN 39
0.9019
ASN 39
THR 40
0.2456
THR 40
GLN 41
1.0646
GLN 41
ALA 42
0.7509
ALA 42
THR 43
0.9318
THR 43
ASN 44
0.7162
ASN 44
ARG 45
0.8668
ARG 45
ASN 46
1.3643
ASN 46
THR 47
1.7028
THR 47
ASP 48
1.5952
ASP 48
GLY 49
1.2415
GLY 49
SER 50
1.3863
SER 50
THR 51
0.9799
THR 51
ASP 52
-0.1143
ASP 52
TYR 53
0.6152
TYR 53
GLY 54
0.8953
GLY 54
ILE 55
0.5981
ILE 55
LEU 56
0.7439
LEU 56
GLN 57
0.5459
GLN 57
ILE 58
0.5410
ILE 58
ASN 59
0.4240
ASN 59
SER 60
0.5237
SER 60
ARG 61
0.0987
ARG 61
TRP 62
0.0007
TRP 62
TRP 63
0.6241
TRP 63
CYS 64
0.2584
CYS 64
ASN 65
-0.3927
ASN 65
ASP 66
0.5060
ASP 66
GLY 67
1.0083
GLY 67
ARG 68
0.4573
ARG 68
THR 69
1.1698
THR 69
PRO 70
1.0878
PRO 70
GLY 71
1.2858
GLY 71
SER 72
-0.4506
SER 72
ARG 73
0.1085
ARG 73
ASN 74
0.8108
ASN 74
LEU 75
0.2117
LEU 75
CYS 76
-0.2630
CYS 76
ASN 77
1.1303
ASN 77
ILE 78
0.9751
ILE 78
PRO 79
0.3194
PRO 79
CYS 80
0.8399
CYS 80
SER 81
1.0329
SER 81
ALA 82
0.1219
ALA 82
LEU 83
0.5377
LEU 83
LEU 84
0.9942
LEU 84
SER 85
0.8606
SER 85
SER 86
0.7729
SER 86
ASP 87
0.9882
ASP 87
ILE 88
0.6653
ILE 88
THR 89
0.3469
THR 89
ALA 90
0.8886
ALA 90
SER 91
0.3161
SER 91
VAL 92
0.9238
VAL 92
ASN 93
0.1461
ASN 93
CYS 94
0.2780
CYS 94
ALA 95
0.3209
ALA 95
LYS 96
0.6024
LYS 96
LYS 97
-0.0289
LYS 97
ILE 98
0.4712
ILE 98
VAL 99
0.7037
VAL 99
SER 100
0.4366
SER 100
ASP 101
0.3569
ASP 101
GLY 102
1.0756
GLY 102
ASN 103
1.0650
ASN 103
GLY 104
0.8641
GLY 104
MET 105
0.6047
MET 105
ASN 106
1.0232
ASN 106
ALA 107
0.8631
ALA 107
TRP 108
0.4333
TRP 108
VAL 109
0.9744
VAL 109
ALA 110
0.5209
ALA 110
TRP 111
0.2997
TRP 111
ARG 112
1.0881
ARG 112
ASN 113
0.4565
ASN 113
ARG 114
0.9136
ARG 114
CYS 115
0.4901
CYS 115
LYS 116
0.9515
LYS 116
GLY 117
0.8724
GLY 117
THR 118
1.2294
THR 118
ASP 119
0.9648
ASP 119
VAL 120
-0.3434
VAL 120
GLN 121
0.9463
GLN 121
ALA 122
-0.3378
ALA 122
TRP 123
-0.3401
TRP 123
ILE 124
0.6917
ILE 124
ARG 125
-0.0697
ARG 125
GLY 126
1.2793
GLY 126
CYS 127
0.1860
CYS 127
ARG 128
1.3685
ARG 128
LEU 129
1.4730
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.