This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.8841
VAL 2
PHE 3
0.4286
PHE 3
GLY 4
0.3266
GLY 4
ARG 5
0.7945
ARG 5
CYS 6
1.0087
CYS 6
GLU 7
0.7881
GLU 7
LEU 8
0.3856
LEU 8
ALA 9
0.4943
ALA 9
ALA 10
0.4322
ALA 10
ALA 11
-0.2664
ALA 11
MET 12
0.6900
MET 12
LYS 13
0.3986
LYS 13
ARG 14
0.6343
ARG 14
HIS 15
1.0407
HIS 15
GLY 16
0.3008
GLY 16
LEU 17
0.3599
LEU 17
ASP 18
-0.2796
ASP 18
ASN 19
0.5902
ASN 19
TYR 20
0.3618
TYR 20
ARG 21
0.4830
ARG 21
GLY 22
0.4316
GLY 22
TYR 23
0.0768
TYR 23
SER 24
0.8735
SER 24
LEU 25
0.6126
LEU 25
GLY 26
0.2023
GLY 26
ASN 27
0.6609
ASN 27
TRP 28
0.4508
TRP 28
VAL 29
0.3887
VAL 29
CYS 30
0.7768
CYS 30
ALA 31
0.3764
ALA 31
ALA 32
0.5232
ALA 32
LYS 33
0.3499
LYS 33
PHE 34
0.8172
PHE 34
GLU 35
0.8663
GLU 35
SER 36
0.8272
SER 36
ASN 37
0.8312
ASN 37
PHE 38
0.6336
PHE 38
ASN 39
0.6852
ASN 39
THR 40
1.0772
THR 40
GLN 41
0.8705
GLN 41
ALA 42
0.0805
ALA 42
THR 43
1.1708
THR 43
ASN 44
1.1898
ASN 44
ARG 45
1.0354
ARG 45
ASN 46
1.3237
ASN 46
THR 47
1.7324
THR 47
ASP 48
1.5801
ASP 48
GLY 49
1.4001
GLY 49
SER 50
1.4426
SER 50
THR 51
1.0905
THR 51
ASP 52
-0.6041
ASP 52
TYR 53
0.3814
TYR 53
GLY 54
0.7537
GLY 54
ILE 55
1.2439
ILE 55
LEU 56
0.4501
LEU 56
GLN 57
0.8790
GLN 57
ILE 58
0.7604
ILE 58
ASN 59
0.8005
ASN 59
SER 60
0.1520
SER 60
ARG 61
0.7155
ARG 61
TRP 62
0.7454
TRP 62
TRP 63
0.1423
TRP 63
CYS 64
0.4550
CYS 64
ASN 65
-0.3319
ASN 65
ASP 66
0.1771
ASP 66
GLY 67
0.8677
GLY 67
ARG 68
1.0876
ARG 68
THR 69
0.4079
THR 69
PRO 70
1.3917
PRO 70
GLY 71
1.2296
GLY 71
SER 72
1.2276
SER 72
ARG 73
0.6236
ARG 73
ASN 74
0.9296
ASN 74
LEU 75
0.3556
LEU 75
CYS 76
0.5399
CYS 76
ASN 77
0.8392
ASN 77
ILE 78
0.5393
ILE 78
PRO 79
0.5828
PRO 79
CYS 80
0.7306
CYS 80
SER 81
0.5296
SER 81
ALA 82
0.6386
ALA 82
LEU 83
0.9496
LEU 83
LEU 84
0.5243
LEU 84
SER 85
0.7617
SER 85
SER 86
1.1300
SER 86
ASP 87
0.7107
ASP 87
ILE 88
0.9857
ILE 88
THR 89
0.9183
THR 89
ALA 90
0.7771
ALA 90
SER 91
0.8539
SER 91
VAL 92
0.2454
VAL 92
ASN 93
0.8691
ASN 93
CYS 94
-0.1982
CYS 94
ALA 95
0.9471
ALA 95
LYS 96
0.2280
LYS 96
LYS 97
0.0766
LYS 97
ILE 98
0.5979
ILE 98
VAL 99
0.5205
VAL 99
SER 100
0.4811
SER 100
ASP 101
0.3057
ASP 101
GLY 102
0.9808
GLY 102
ASN 103
0.0576
ASN 103
GLY 104
0.9177
GLY 104
MET 105
0.3814
MET 105
ASN 106
0.4214
ASN 106
ALA 107
0.8316
ALA 107
TRP 108
0.1385
TRP 108
VAL 109
1.0953
VAL 109
ALA 110
-0.0008
ALA 110
TRP 111
0.3909
TRP 111
ARG 112
0.7086
ARG 112
ASN 113
0.8600
ASN 113
ARG 114
0.3842
ARG 114
CYS 115
0.7663
CYS 115
LYS 116
0.5726
LYS 116
GLY 117
1.5280
GLY 117
THR 118
1.0120
THR 118
ASP 119
1.0634
ASP 119
VAL 120
1.4644
VAL 120
GLN 121
1.0917
GLN 121
ALA 122
0.7772
ALA 122
TRP 123
1.2721
TRP 123
ILE 124
1.0342
ILE 124
ARG 125
0.9732
ARG 125
GLY 126
0.6529
GLY 126
CYS 127
0.3394
CYS 127
ARG 128
1.4682
ARG 128
LEU 129
1.3035
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.