This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0904
VAL 2
PHE 3
-0.0991
PHE 3
GLY 4
0.0426
GLY 4
ARG 5
-0.3186
ARG 5
CYS 6
-0.1205
CYS 6
GLU 7
-0.6360
GLU 7
LEU 8
-0.1224
LEU 8
ALA 9
-0.0755
ALA 9
ALA 10
0.0178
ALA 10
ALA 11
-0.1677
ALA 11
MET 12
-0.1173
MET 12
LYS 13
-0.1301
LYS 13
ARG 14
0.1804
ARG 14
HIS 15
-0.3741
HIS 15
GLY 16
0.2725
GLY 16
LEU 17
-0.0379
LEU 17
ASP 18
0.0596
ASP 18
ASN 19
-0.0543
ASN 19
TYR 20
0.1279
TYR 20
ARG 21
0.0615
ARG 21
GLY 22
0.0125
GLY 22
TYR 23
-0.0838
TYR 23
SER 24
0.0816
SER 24
LEU 25
-0.0838
LEU 25
GLY 26
0.0921
GLY 26
ASN 27
-0.1981
ASN 27
TRP 28
0.2645
TRP 28
VAL 29
-0.1692
VAL 29
CYS 30
-0.4378
CYS 30
ALA 31
0.1982
ALA 31
ALA 32
-0.0680
ALA 32
LYS 33
-0.0774
LYS 33
PHE 34
-0.3193
PHE 34
GLU 35
0.1050
GLU 35
SER 36
0.2622
SER 36
ASN 37
-0.1357
ASN 37
PHE 38
-0.1581
PHE 38
ASN 39
0.2269
ASN 39
THR 40
0.0010
THR 40
GLN 41
-0.1852
GLN 41
ALA 42
0.2026
ALA 42
THR 43
0.3590
THR 43
ASN 44
0.3155
ASN 44
ARG 45
-0.0812
ARG 45
ASN 46
-0.1070
ASN 46
THR 47
0.5236
THR 47
ASP 48
-0.6749
ASP 48
GLY 49
0.2841
GLY 49
SER 50
0.0105
SER 50
THR 51
0.0991
THR 51
ASP 52
-0.3675
ASP 52
TYR 53
0.0120
TYR 53
GLY 54
0.0181
GLY 54
ILE 55
0.0362
ILE 55
LEU 56
0.3711
LEU 56
GLN 57
-0.0673
GLN 57
ILE 58
0.0806
ILE 58
ASN 59
-0.1035
ASN 59
SER 60
-0.1541
SER 60
ARG 61
0.0063
ARG 61
TRP 62
0.1371
TRP 62
TRP 63
0.0847
TRP 63
CYS 64
0.0253
CYS 64
ASN 65
-0.0837
ASN 65
ASP 66
-0.0601
ASP 66
GLY 67
0.3157
GLY 67
ARG 68
0.0711
ARG 68
THR 69
0.3202
THR 69
PRO 70
-0.2373
PRO 70
GLY 71
0.3391
GLY 71
SER 72
-0.1033
SER 72
ARG 73
0.3363
ARG 73
ASN 74
0.1570
ASN 74
LEU 75
-0.4072
LEU 75
CYS 76
0.2865
CYS 76
ASN 77
0.0339
ASN 77
ILE 78
-0.1891
ILE 78
PRO 79
-0.0365
PRO 79
CYS 80
-0.1894
CYS 80
SER 81
0.1338
SER 81
ALA 82
-0.1377
ALA 82
LEU 83
0.0347
LEU 83
LEU 84
0.2020
LEU 84
SER 85
-0.1219
SER 85
SER 86
1.0087
SER 86
ASP 87
-0.1951
ASP 87
ILE 88
0.0000
ILE 88
THR 89
-0.0410
THR 89
ALA 90
-0.2123
ALA 90
SER 91
-0.1564
SER 91
VAL 92
0.1236
VAL 92
ASN 93
-0.2794
ASN 93
CYS 94
-0.1839
CYS 94
ALA 95
-0.0565
ALA 95
LYS 96
0.1623
LYS 96
LYS 97
-0.2234
LYS 97
ILE 98
-0.2483
ILE 98
VAL 99
0.3329
VAL 99
SER 100
-0.0614
SER 100
ASP 101
-0.1677
ASP 101
GLY 102
0.3754
GLY 102
ASN 103
0.0325
ASN 103
GLY 104
0.4357
GLY 104
MET 105
0.0339
MET 105
ASN 106
-0.2044
ASN 106
ALA 107
0.1142
ALA 107
TRP 108
-0.1774
TRP 108
VAL 109
-0.5504
VAL 109
ALA 110
-0.1456
ALA 110
TRP 111
0.0647
TRP 111
ARG 112
-0.1832
ARG 112
ASN 113
-0.1842
ASN 113
ARG 114
-0.0767
ARG 114
CYS 115
0.0934
CYS 115
LYS 116
-0.2377
LYS 116
GLY 117
0.1359
GLY 117
THR 118
0.0650
THR 118
ASP 119
0.3511
ASP 119
VAL 120
0.2746
VAL 120
GLN 121
0.0545
GLN 121
ALA 122
0.0313
ALA 122
TRP 123
0.1512
TRP 123
ILE 124
0.0786
ILE 124
ARG 125
0.1306
ARG 125
GLY 126
0.0035
GLY 126
CYS 127
0.0900
CYS 127
ARG 128
-0.6172
ARG 128
LEU 129
0.0803
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.