This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0378
VAL 2
PHE 3
-0.1388
PHE 3
GLY 4
-0.0681
GLY 4
ARG 5
-0.3868
ARG 5
CYS 6
0.1424
CYS 6
GLU 7
-0.2078
GLU 7
LEU 8
0.1095
LEU 8
ALA 9
-0.2393
ALA 9
ALA 10
0.0775
ALA 10
ALA 11
0.0833
ALA 11
MET 12
-0.0620
MET 12
LYS 13
-0.0240
LYS 13
ARG 14
-0.0391
ARG 14
HIS 15
0.0945
HIS 15
GLY 16
-0.0618
GLY 16
LEU 17
-0.1864
LEU 17
ASP 18
0.0976
ASP 18
ASN 19
-0.0315
ASN 19
TYR 20
0.0735
TYR 20
ARG 21
-0.0433
ARG 21
GLY 22
0.0856
GLY 22
TYR 23
-0.0325
TYR 23
SER 24
-0.0115
SER 24
LEU 25
-0.2111
LEU 25
GLY 26
-0.0682
GLY 26
ASN 27
0.2103
ASN 27
TRP 28
-0.0802
TRP 28
VAL 29
0.0999
VAL 29
CYS 30
0.0929
CYS 30
ALA 31
0.1578
ALA 31
ALA 32
-0.0347
ALA 32
LYS 33
0.1178
LYS 33
PHE 34
0.0019
PHE 34
GLU 35
-0.0367
GLU 35
SER 36
-0.1661
SER 36
ASN 37
0.1800
ASN 37
PHE 38
0.0573
PHE 38
ASN 39
-0.3434
ASN 39
THR 40
-0.0143
THR 40
GLN 41
-0.1819
GLN 41
ALA 42
-0.0888
ALA 42
THR 43
0.0426
THR 43
ASN 44
0.1372
ASN 44
ARG 45
-0.6008
ARG 45
ASN 46
-0.2029
ASN 46
THR 47
-0.2556
THR 47
ASP 48
0.3403
ASP 48
GLY 49
-0.2133
GLY 49
SER 50
-0.0139
SER 50
THR 51
0.1187
THR 51
ASP 52
-0.0555
ASP 52
TYR 53
-0.1830
TYR 53
GLY 54
0.2692
GLY 54
ILE 55
0.0823
ILE 55
LEU 56
0.0125
LEU 56
GLN 57
-0.4336
GLN 57
ILE 58
0.0823
ILE 58
ASN 59
0.0556
ASN 59
SER 60
-0.0117
SER 60
ARG 61
0.2258
ARG 61
TRP 62
-0.0540
TRP 62
TRP 63
0.0809
TRP 63
CYS 64
0.2888
CYS 64
ASN 65
0.0272
ASN 65
ASP 66
-0.1158
ASP 66
GLY 67
0.4174
GLY 67
ARG 68
0.0375
ARG 68
THR 69
-0.0669
THR 69
PRO 70
0.0815
PRO 70
GLY 71
0.5324
GLY 71
SER 72
-0.0363
SER 72
ARG 73
0.0597
ARG 73
ASN 74
0.4615
ASN 74
LEU 75
0.1425
LEU 75
CYS 76
0.0633
CYS 76
ASN 77
0.1515
ASN 77
ILE 78
-0.0343
ILE 78
PRO 79
0.1380
PRO 79
CYS 80
-0.2783
CYS 80
SER 81
0.0389
SER 81
ALA 82
-0.0062
ALA 82
LEU 83
-0.0683
LEU 83
LEU 84
0.1680
LEU 84
SER 85
-0.1367
SER 85
SER 86
0.3227
SER 86
ASP 87
0.0547
ASP 87
ILE 88
-0.1151
ILE 88
THR 89
0.0461
THR 89
ALA 90
0.0594
ALA 90
SER 91
0.0069
SER 91
VAL 92
-0.0654
VAL 92
ASN 93
0.0952
ASN 93
CYS 94
-0.1903
CYS 94
ALA 95
0.1799
ALA 95
LYS 96
-0.1599
LYS 96
LYS 97
0.1440
LYS 97
ILE 98
0.1345
ILE 98
VAL 99
0.1019
VAL 99
SER 100
-0.1286
SER 100
ASP 101
0.1631
ASP 101
GLY 102
0.1531
GLY 102
ASN 103
-0.1025
ASN 103
GLY 104
-0.2935
GLY 104
MET 105
-0.2198
MET 105
ASN 106
0.0460
ASN 106
ALA 107
-0.0509
ALA 107
TRP 108
0.5555
TRP 108
VAL 109
-0.3537
VAL 109
ALA 110
0.2332
ALA 110
TRP 111
-0.1260
TRP 111
ARG 112
0.1198
ARG 112
ASN 113
-0.2901
ASN 113
ARG 114
0.2295
ARG 114
CYS 115
0.1392
CYS 115
LYS 116
-0.2753
LYS 116
GLY 117
-0.0772
GLY 117
THR 118
-0.0201
THR 118
ASP 119
0.6031
ASP 119
VAL 120
-0.1929
VAL 120
GLN 121
0.4368
GLN 121
ALA 122
-0.0110
ALA 122
TRP 123
0.0232
TRP 123
ILE 124
0.0072
ILE 124
ARG 125
0.3195
ARG 125
GLY 126
0.0527
GLY 126
CYS 127
0.0143
CYS 127
ARG 128
0.2803
ARG 128
LEU 129
-0.0364
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.