This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1246
VAL 2
PHE 3
0.0544
PHE 3
GLY 4
-0.0112
GLY 4
ARG 5
-0.0781
ARG 5
CYS 6
0.2683
CYS 6
GLU 7
-0.2968
GLU 7
LEU 8
-0.0056
LEU 8
ALA 9
-0.1367
ALA 9
ALA 10
-0.0031
ALA 10
ALA 11
-0.3163
ALA 11
MET 12
0.1342
MET 12
LYS 13
-0.2311
LYS 13
ARG 14
-0.0575
ARG 14
HIS 15
-0.2292
HIS 15
GLY 16
-0.0335
GLY 16
LEU 17
0.0450
LEU 17
ASP 18
-0.2479
ASP 18
ASN 19
0.1280
ASN 19
TYR 20
-0.2127
TYR 20
ARG 21
0.1095
ARG 21
GLY 22
-0.0548
GLY 22
TYR 23
-0.0490
TYR 23
SER 24
0.0733
SER 24
LEU 25
0.0722
LEU 25
GLY 26
-0.0674
GLY 26
ASN 27
0.0299
ASN 27
TRP 28
-0.0233
TRP 28
VAL 29
0.0625
VAL 29
CYS 30
-0.0316
CYS 30
ALA 31
0.0666
ALA 31
ALA 32
0.0690
ALA 32
LYS 33
0.0027
LYS 33
PHE 34
-0.0325
PHE 34
GLU 35
0.2526
GLU 35
SER 36
0.1926
SER 36
ASN 37
-0.1417
ASN 37
PHE 38
0.0013
PHE 38
ASN 39
0.0733
ASN 39
THR 40
0.2747
THR 40
GLN 41
-0.0946
GLN 41
ALA 42
-0.1586
ALA 42
THR 43
-0.5529
THR 43
ASN 44
-0.2270
ASN 44
ARG 45
-0.6131
ARG 45
ASN 46
0.1016
ASN 46
THR 47
-0.3620
THR 47
ASP 48
0.1992
ASP 48
GLY 49
0.1118
GLY 49
SER 50
-0.1493
SER 50
THR 51
-0.2113
THR 51
ASP 52
-0.2079
ASP 52
TYR 53
-0.0976
TYR 53
GLY 54
-0.3980
GLY 54
ILE 55
-0.2270
ILE 55
LEU 56
0.0731
LEU 56
GLN 57
-0.5287
GLN 57
ILE 58
0.1389
ILE 58
ASN 59
-0.6280
ASN 59
SER 60
-0.0061
SER 60
ARG 61
-0.0214
ARG 61
TRP 62
-0.0412
TRP 62
TRP 63
-0.0908
TRP 63
CYS 64
0.0098
CYS 64
ASN 65
-0.0598
ASN 65
ASP 66
0.0271
ASP 66
GLY 67
-0.0923
GLY 67
ARG 68
0.2790
ARG 68
THR 69
-0.0801
THR 69
PRO 70
-0.0620
PRO 70
GLY 71
0.0199
GLY 71
SER 72
0.1755
SER 72
ARG 73
0.0183
ARG 73
ASN 74
0.0163
ASN 74
LEU 75
-0.0073
LEU 75
CYS 76
-0.0010
CYS 76
ASN 77
-0.0109
ASN 77
ILE 78
0.0643
ILE 78
PRO 79
-0.0119
PRO 79
CYS 80
0.0828
CYS 80
SER 81
-0.0053
SER 81
ALA 82
-0.1300
ALA 82
LEU 83
0.1150
LEU 83
LEU 84
0.0837
LEU 84
SER 85
-0.3301
SER 85
SER 86
-0.0105
SER 86
ASP 87
0.1825
ASP 87
ILE 88
0.0521
ILE 88
THR 89
0.1717
THR 89
ALA 90
-0.2851
ALA 90
SER 91
0.1512
SER 91
VAL 92
-0.2513
VAL 92
ASN 93
-0.0256
ASN 93
CYS 94
-0.1151
CYS 94
ALA 95
0.0242
ALA 95
LYS 96
-0.0355
LYS 96
LYS 97
-0.0989
LYS 97
ILE 98
0.0692
ILE 98
VAL 99
-0.1253
VAL 99
SER 100
-0.0496
SER 100
ASP 101
0.0101
ASP 101
GLY 102
-0.1136
GLY 102
ASN 103
-0.1260
ASN 103
GLY 104
0.1541
GLY 104
MET 105
-0.0142
MET 105
ASN 106
0.0096
ASN 106
ALA 107
0.2572
ALA 107
TRP 108
-0.1237
TRP 108
VAL 109
0.2091
VAL 109
ALA 110
-0.1209
ALA 110
TRP 111
-0.0775
TRP 111
ARG 112
-0.0200
ARG 112
ASN 113
-0.1024
ASN 113
ARG 114
0.0092
ARG 114
CYS 115
-0.0601
CYS 115
LYS 116
0.0526
LYS 116
GLY 117
0.0078
GLY 117
THR 118
0.0533
THR 118
ASP 119
0.2314
ASP 119
VAL 120
-0.1210
VAL 120
GLN 121
0.1534
GLN 121
ALA 122
-0.0263
ALA 122
TRP 123
0.0433
TRP 123
ILE 124
0.0496
ILE 124
ARG 125
-0.0440
ARG 125
GLY 126
0.0522
GLY 126
CYS 127
-0.1602
CYS 127
ARG 128
0.2700
ARG 128
LEU 129
-0.3253
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.