CNRS Nantes University US2B US2B
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***  lysozyme  ***

CA strain for 2402132254172667999

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1VAL 2 -0.0327
VAL 2PHE 3 0.0650
PHE 3GLY 4 -0.0872
GLY 4ARG 5 -0.3386
ARG 5CYS 6 0.6070
CYS 6GLU 7 -0.1366
GLU 7LEU 8 0.0565
LEU 8ALA 9 0.0250
ALA 9ALA 10 0.0180
ALA 10ALA 11 -0.1945
ALA 11MET 12 0.0095
MET 12LYS 13 -0.0921
LYS 13ARG 14 0.1029
ARG 14HIS 15 -0.1766
HIS 15GLY 16 0.1738
GLY 16LEU 17 0.0915
LEU 17ASP 18 -0.0387
ASP 18ASN 19 -0.1944
ASN 19TYR 20 0.1501
TYR 20ARG 21 -0.1251
ARG 21GLY 22 0.1455
GLY 22TYR 23 0.0259
TYR 23SER 24 -0.1591
SER 24LEU 25 -0.0421
LEU 25GLY 26 0.0561
GLY 26ASN 27 -0.0175
ASN 27TRP 28 0.0724
TRP 28VAL 29 0.1216
VAL 29CYS 30 0.0795
CYS 30ALA 31 -0.0178
ALA 31ALA 32 0.0690
ALA 32LYS 33 -0.0298
LYS 33PHE 34 0.2050
PHE 34GLU 35 -0.3432
GLU 35SER 36 0.1699
SER 36ASN 37 -0.0794
ASN 37PHE 38 0.1135
PHE 38ASN 39 -0.1203
ASN 39THR 40 -0.0507
THR 40GLN 41 0.0110
GLN 41ALA 42 -0.0224
ALA 42THR 43 -0.1272
THR 43ASN 44 -0.0448
ASN 44ARG 45 -0.0376
ARG 45ASN 46 -0.0584
ASN 46THR 47 0.0851
THR 47ASP 48 0.0298
ASP 48GLY 49 0.0329
GLY 49SER 50 0.0077
SER 50THR 51 -0.0744
THR 51ASP 52 -0.0448
ASP 52TYR 53 0.0008
TYR 53GLY 54 -0.0704
GLY 54ILE 55 -0.0817
ILE 55LEU 56 0.1005
LEU 56GLN 57 -0.0060
GLN 57ILE 58 -0.1126
ILE 58ASN 59 -0.0156
ASN 59SER 60 -0.0060
SER 60ARG 61 -0.0549
ARG 61TRP 62 0.0805
TRP 62TRP 63 0.0023
TRP 63CYS 64 0.0640
CYS 64ASN 65 -0.0032
ASN 65ASP 66 -0.0236
ASP 66GLY 67 0.0008
GLY 67ARG 68 -0.0421
ARG 68THR 69 0.0453
THR 69PRO 70 -0.0324
PRO 70GLY 71 0.0272
GLY 71SER 72 -0.0027
SER 72ARG 73 -0.0072
ARG 73ASN 74 0.0542
ASN 74LEU 75 -0.0168
LEU 75CYS 76 0.0294
CYS 76ASN 77 -0.0173
ASN 77ILE 78 -0.0240
ILE 78PRO 79 -0.0197
PRO 79CYS 80 -0.0164
CYS 80SER 81 0.0225
SER 81ALA 82 -0.0298
ALA 82LEU 83 -0.0158
LEU 83LEU 84 0.0574
LEU 84SER 85 -0.0532
SER 85SER 86 -0.0523
SER 86ASP 87 0.0439
ASP 87ILE 88 0.0093
ILE 88THR 89 -0.0282
THR 89ALA 90 -0.0515
ALA 90SER 91 -0.0081
SER 91VAL 92 0.0077
VAL 92ASN 93 -0.0494
ASN 93CYS 94 -0.0083
CYS 94ALA 95 -0.0062
ALA 95LYS 96 0.0340
LYS 96LYS 97 -0.0402
LYS 97ILE 98 -0.0359
ILE 98VAL 99 0.1342
VAL 99SER 100 0.0533
SER 100ASP 101 0.0364
ASP 101GLY 102 0.1122
GLY 102ASN 103 0.0824
ASN 103GLY 104 -0.2371
GLY 104MET 105 0.0672
MET 105ASN 106 -0.0884
ASN 106ALA 107 0.0190
ALA 107TRP 108 0.1792
TRP 108VAL 109 -0.2672
VAL 109ALA 110 0.1060
ALA 110TRP 111 -0.0111
TRP 111ARG 112 0.0234
ARG 112ASN 113 0.0186
ASN 113ARG 114 0.0603
ARG 114CYS 115 -0.0140
CYS 115LYS 116 0.0064
LYS 116GLY 117 0.0893
GLY 117THR 118 0.1086
THR 118ASP 119 -0.0620
ASP 119VAL 120 0.0907
VAL 120GLN 121 -0.1025
GLN 121ALA 122 -0.0260
ALA 122TRP 123 -0.2384
TRP 123ILE 124 0.3513
ILE 124ARG 125 -0.0513
ARG 125GLY 126 0.0386
GLY 126CYS 127 -0.4207
CYS 127ARG 128 0.4559
ARG 128LEU 129 -0.3843

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.