This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0217
VAL 2
PHE 3
0.0482
PHE 3
GLY 4
0.1539
GLY 4
ARG 5
0.1620
ARG 5
CYS 6
-0.0026
CYS 6
GLU 7
0.0839
GLU 7
LEU 8
-0.0294
LEU 8
ALA 9
0.0638
ALA 9
ALA 10
-0.0290
ALA 10
ALA 11
-0.0787
ALA 11
MET 12
0.0162
MET 12
LYS 13
-0.0309
LYS 13
ARG 14
0.0068
ARG 14
HIS 15
-0.1074
HIS 15
GLY 16
0.0613
GLY 16
LEU 17
0.0761
LEU 17
ASP 18
-0.1213
ASP 18
ASN 19
0.0139
ASN 19
TYR 20
-0.1975
TYR 20
ARG 21
0.0552
ARG 21
GLY 22
-0.1741
GLY 22
TYR 23
0.0609
TYR 23
SER 24
-0.1921
SER 24
LEU 25
0.0458
LEU 25
GLY 26
0.0037
GLY 26
ASN 27
-0.0454
ASN 27
TRP 28
-0.0309
TRP 28
VAL 29
-0.0690
VAL 29
CYS 30
-0.0180
CYS 30
ALA 31
0.0427
ALA 31
ALA 32
-0.0594
ALA 32
LYS 33
-0.0144
LYS 33
PHE 34
-0.0786
PHE 34
GLU 35
0.3097
GLU 35
SER 36
-0.1921
SER 36
ASN 37
0.1462
ASN 37
PHE 38
-0.0721
PHE 38
ASN 39
0.2651
ASN 39
THR 40
0.0932
THR 40
GLN 41
-0.0540
GLN 41
ALA 42
-0.1631
ALA 42
THR 43
0.2134
THR 43
ASN 44
-0.2464
ASN 44
ARG 45
0.2895
ARG 45
ASN 46
-0.0086
ASN 46
THR 47
0.1398
THR 47
ASP 48
0.0005
ASP 48
GLY 49
0.0856
GLY 49
SER 50
0.0128
SER 50
THR 51
0.0782
THR 51
ASP 52
0.1467
ASP 52
TYR 53
-0.1246
TYR 53
GLY 54
0.2497
GLY 54
ILE 55
0.1935
ILE 55
LEU 56
-0.0668
LEU 56
GLN 57
0.1362
GLN 57
ILE 58
0.0290
ILE 58
ASN 59
-0.1159
ASN 59
SER 60
-0.0245
SER 60
ARG 61
0.1180
ARG 61
TRP 62
-0.1057
TRP 62
TRP 63
0.0980
TRP 63
CYS 64
-0.2735
CYS 64
ASN 65
-0.1262
ASN 65
ASP 66
-0.1845
ASP 66
GLY 67
0.2432
GLY 67
ARG 68
-0.2346
ARG 68
THR 69
-0.0897
THR 69
PRO 70
0.1675
PRO 70
GLY 71
-0.1615
GLY 71
SER 72
0.1778
SER 72
ARG 73
-0.3097
ARG 73
ASN 74
0.3713
ASN 74
LEU 75
-0.2790
LEU 75
CYS 76
0.0556
CYS 76
ASN 77
-0.0636
ASN 77
ILE 78
0.0830
ILE 78
PRO 79
-0.1314
PRO 79
CYS 80
-0.0744
CYS 80
SER 81
-0.0086
SER 81
ALA 82
-0.1003
ALA 82
LEU 83
0.0312
LEU 83
LEU 84
-0.0048
LEU 84
SER 85
-0.1298
SER 85
SER 86
0.2434
SER 86
ASP 87
-0.0774
ASP 87
ILE 88
-0.0199
ILE 88
THR 89
0.0147
THR 89
ALA 90
-0.0145
ALA 90
SER 91
0.0172
SER 91
VAL 92
-0.0308
VAL 92
ASN 93
-0.0380
ASN 93
CYS 94
-0.0256
CYS 94
ALA 95
-0.0966
ALA 95
LYS 96
0.0378
LYS 96
LYS 97
-0.2589
LYS 97
ILE 98
0.0315
ILE 98
VAL 99
-0.2606
VAL 99
SER 100
0.0601
SER 100
ASP 101
-0.3057
ASP 101
GLY 102
-0.1108
GLY 102
ASN 103
0.0088
ASN 103
GLY 104
0.0916
GLY 104
MET 105
-0.0332
MET 105
ASN 106
0.0547
ASN 106
ALA 107
-0.2149
ALA 107
TRP 108
-0.0182
TRP 108
VAL 109
0.0503
VAL 109
ALA 110
0.0031
ALA 110
TRP 111
0.0335
TRP 111
ARG 112
0.0137
ARG 112
ASN 113
-0.0402
ASN 113
ARG 114
0.0345
ARG 114
CYS 115
0.0126
CYS 115
LYS 116
-0.0143
LYS 116
GLY 117
-0.0546
GLY 117
THR 118
-0.0279
THR 118
ASP 119
0.0729
ASP 119
VAL 120
-0.0826
VAL 120
GLN 121
0.0696
GLN 121
ALA 122
-0.0462
ALA 122
TRP 123
0.0824
TRP 123
ILE 124
0.1029
ILE 124
ARG 125
-0.0924
ARG 125
GLY 126
-0.0121
GLY 126
CYS 127
-0.0765
CYS 127
ARG 128
0.2067
ARG 128
LEU 129
-0.1666
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.