This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLN -7
GLN -6
0.0014
GLN -6
MET -5
0.0064
MET -5
GLY -4
-0.0190
GLY -4
ARG -3
-0.0122
ARG -3
GLY -2
-0.0560
GLY -2
SER -1
0.0922
SER -1
MET 0
-0.0142
MET 0
MET 0
0.0097
MET 0
CYS 1
0.0052
CYS 1
CYS 1
0.0005
CYS 1
ASP 2
0.0004
ASP 2
ALA 3
0.0221
ALA 3
PHE 4
-0.0024
PHE 4
VAL 5
-0.0008
VAL 5
GLY 6
0.0031
GLY 6
THR 7
0.0013
THR 7
TRP 8
0.0004
TRP 8
LYS 9
0.0005
LYS 9
LEU 10
0.0004
LEU 10
VAL 11
0.0001
VAL 11
SER 12
0.0007
SER 12
SER 13
0.0007
SER 13
GLU 14
0.0002
GLU 14
GLU 14
0.0021
GLU 14
ASN 15
0.0001
ASN 15
ASN 15
0.0188
ASN 15
PHE 16
-0.0001
PHE 16
ASP 17
0.0004
ASP 17
ASP 18
0.0004
ASP 18
TYR 19
-0.0004
TYR 19
MET 20
0.0001
MET 20
LYS 21
-0.0002
LYS 21
GLU 22
0.0001
GLU 22
VAL 23
0.0000
VAL 23
GLY 24
0.0001
GLY 24
VAL 25
-0.0001
VAL 25
GLY 26
-0.0003
GLY 26
PHE 27
0.0002
PHE 27
ALA 28
-0.0001
ALA 28
THR 29
0.0000
THR 29
ARG 30
-0.0003
ARG 30
LYS 31
-0.0002
LYS 31
VAL 32
0.0001
VAL 32
VAL 32
-0.0045
VAL 32
ALA 33
0.0004
ALA 33
GLY 34
0.0002
GLY 34
MET 35
-0.0004
MET 35
ALA 36
0.0001
ALA 36
LYS 37
0.0003
LYS 37
PRO 38
-0.0001
PRO 38
ASN 39
0.0006
ASN 39
MET 40
0.0003
MET 40
ILE 41
0.0007
ILE 41
ILE 42
0.0015
ILE 42
SER 43
0.0003
SER 43
VAL 44
0.0064
VAL 44
ASN 45
-0.0003
ASN 45
GLY 46
-0.0085
GLY 46
ASP 47
-0.0366
ASP 47
VAL 48
0.0023
VAL 48
ILE 49
0.0008
ILE 49
THR 50
0.0011
THR 50
ILE 51
0.0001
ILE 51
LYS 52
0.0007
LYS 52
SER 53
0.0004
SER 53
GLU 54
-0.0001
GLU 54
SER 55
0.0007
SER 55
SER 55
-0.0018
SER 55
THR 56
0.0004
THR 56
THR 56
-0.0004
THR 56
PHE 57
0.0002
PHE 57
PHE 57
-0.0002
PHE 57
LYS 58
-0.0002
LYS 58
LYS 58
-0.0011
LYS 58
ASN 59
0.0002
ASN 59
THR 60
0.0001
THR 60
GLU 61
0.0004
GLU 61
ILE 62
0.0002
ILE 62
SER 63
-0.0013
SER 63
PHE 64
0.0012
PHE 64
ILE 65
0.0001
ILE 65
LEU 66
0.0015
LEU 66
GLY 67
0.0001
GLY 67
GLN 68
0.0003
GLN 68
GLU 69
-0.0010
GLU 69
PHE 70
0.0001
PHE 70
ASP 71
0.0000
ASP 71
GLU 72
0.0003
GLU 72
VAL 73
0.0004
VAL 73
VAL 73
-0.0005
VAL 73
THR 74
-0.0004
THR 74
ALA 75
0.0000
ALA 75
ASP 76
0.0004
ASP 76
ASP 77
-0.0002
ASP 77
ARG 78
-0.0000
ARG 78
LYS 79
-0.0003
LYS 79
VAL 80
-0.0002
VAL 80
LYS 81
0.0002
LYS 81
SER 82
0.0001
SER 82
THR 83
0.0005
THR 83
ILE 84
0.0005
ILE 84
THR 85
0.0006
THR 85
LEU 86
0.0012
LEU 86
LEU 86
-0.0022
LEU 86
ASP 87
0.0009
ASP 87
ASP 87
0.0005
ASP 87
GLY 88
-0.0003
GLY 88
GLY 88
-0.0008
GLY 88
GLY 89
0.0003
GLY 89
GLY 89
-0.0002
GLY 89
VAL 90
-0.0032
VAL 90
LEU 91
0.0007
LEU 91
VAL 92
0.0003
VAL 92
HIS 93
-0.0004
HIS 93
VAL 94
0.0004
VAL 94
GLN 95
0.0001
GLN 95
LYS 96
0.0002
LYS 96
TRP 97
-0.0002
TRP 97
ASP 98
0.0000
ASP 98
ASP 98
-0.0004
ASP 98
GLY 99
0.0002
GLY 99
LYS 100
0.0001
LYS 100
SER 101
-0.0002
SER 101
THR 102
0.0001
THR 102
THR 103
-0.0002
THR 103
ILE 104
-0.0000
ILE 104
LYS 105
-0.0001
LYS 105
ARG 106
0.0008
ARG 106
LYS 107
0.0004
LYS 107
ARG 108
0.0011
ARG 108
GLU 109
0.0007
GLU 109
ASP 110
-0.0001
ASP 110
ASP 111
-0.0004
ASP 111
LYS 112
0.0002
LYS 112
LEU 113
0.0001
LEU 113
LEU 113
0.0315
LEU 113
VAL 114
0.0007
VAL 114
VAL 115
0.0004
VAL 115
GLU 116
0.0003
GLU 116
GLU 116
0.0108
GLU 116
CYS 117
0.0003
CYS 117
VAL 118
0.0003
VAL 118
MET 119
-0.0003
MET 119
MET 119
-0.0003
MET 119
LYS 120
-0.0001
LYS 120
LYS 120
0.0020
LYS 120
GLY 121
-0.0001
GLY 121
GLY 121
-0.0022
GLY 121
VAL 122
0.0004
VAL 122
THR 123
-0.0003
THR 123
SER 124
0.0004
SER 124
THR 125
0.0008
THR 125
ARG 126
0.0000
ARG 126
VAL 127
0.0008
VAL 127
TYR 128
0.0003
TYR 128
GLU 129
-0.0003
GLU 129
GLU 129
0.0042
GLU 129
ARG 130
0.0004
ARG 130
ALA 131
0.0002
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.