This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
-0.0169
GLN 2
VAL 3
0.0860
VAL 3
THR 4
-0.0623
THR 4
LEU 5
0.0836
LEU 5
TRP 6
-0.0361
TRP 6
GLN 7
-0.0798
GLN 7
ARG 8
-0.0278
ARG 8
PRO 9
0.0603
PRO 9
LEU 10
0.0562
LEU 10
VAL 11
-0.0093
VAL 11
THR 12
0.1003
THR 12
ILE 13
-0.0418
ILE 13
LYS 14
0.0138
LYS 14
ILE 15
0.0900
ILE 15
GLY 16
0.0288
GLY 16
GLY 17
0.0767
GLY 17
GLN 18
0.0006
GLN 18
LEU 19
0.0732
LEU 19
LYS 20
-0.0147
LYS 20
GLU 21
-0.0037
GLU 21
ALA 22
-0.0325
ALA 22
LEU 23
0.0345
LEU 23
LEU 24
0.0177
LEU 24
ASP 25
0.0222
ASP 25
THR 26
-0.0987
THR 26
GLY 27
-0.0178
GLY 27
ALA 28
-0.0590
ALA 28
ASP 29
0.0060
ASP 29
ASP 30
-0.1575
ASP 30
THR 31
-0.0144
THR 31
VAL 32
-0.0341
VAL 32
LEU 33
-0.1114
LEU 33
GLU 34
0.0025
GLU 34
GLU 35
-0.0667
GLU 35
MET 36
0.0652
MET 36
SER 37
-0.0849
SER 37
LEU 38
-0.0492
LEU 38
PRO 39
-0.0536
PRO 39
GLY 40
0.0034
GLY 40
ARG 41
0.0204
ARG 41
TRP 42
0.0172
TRP 42
LYS 43
0.0502
LYS 43
PRO 44
0.0317
PRO 44
LYS 45
-0.0839
LYS 45
MET 46
0.1774
MET 46
ILE 47
-0.1131
ILE 47
GLY 48
0.2009
GLY 48
GLY 49
0.1405
GLY 49
ILE 50
0.0447
ILE 50
GLY 51
-0.2349
GLY 51
GLY 52
0.0949
GLY 52
PHE 53
-0.1200
PHE 53
ILE 54
0.0629
ILE 54
LYS 55
-0.0589
LYS 55
VAL 56
-0.0432
VAL 56
ARG 57
0.0675
ARG 57
GLN 58
0.0491
GLN 58
TYR 59
0.0546
TYR 59
ASP 60
0.0030
ASP 60
GLN 61
-0.0041
GLN 61
ILE 62
-0.1337
ILE 62
LEU 63
0.0726
LEU 63
ILE 64
-0.0216
ILE 64
GLU 65
-0.0168
GLU 65
ILE 66
0.0323
ILE 66
CYS 67
-0.0231
CYS 67
GLY 68
-0.0268
GLY 68
HIS 69
0.0972
HIS 69
LYS 70
-0.0835
LYS 70
ALA 71
0.0011
ALA 71
ILE 72
-0.1006
ILE 72
GLY 73
-0.0855
GLY 73
THR 74
-0.1202
THR 74
VAL 75
0.0039
VAL 75
LEU 76
0.0352
LEU 76
VAL 77
-0.0887
VAL 77
GLY 78
0.0387
GLY 78
PRO 79
-0.0514
PRO 79
THR 80
-0.0030
THR 80
PRO 81
0.0643
PRO 81
PHE 82
0.0761
PHE 82
ASN 83
-0.0062
ASN 83
VAL 84
-0.0586
VAL 84
ILE 85
0.0148
ILE 85
GLY 86
-0.0399
GLY 86
ARG 87
-0.1237
ARG 87
ASN 88
0.1837
ASN 88
LEU 89
-0.0155
LEU 89
LEU 90
-0.0212
LEU 90
THR 91
0.0833
THR 91
GLN 92
0.2409
GLN 92
ILE 93
-0.0795
ILE 93
GLY 94
0.1950
GLY 94
CYS 95
0.0800
CYS 95
THR 96
-0.0477
THR 96
LEU 97
0.0675
LEU 97
ASN 98
-0.0468
ASN 98
PHE 99
-0.0588
PHE 99
PRO 1
0.0925
PRO 1
GLN 2
-0.0743
GLN 2
VAL 3
-0.0864
VAL 3
THR 4
0.0156
THR 4
LEU 5
-0.1441
LEU 5
TRP 6
0.0419
TRP 6
GLN 7
0.1408
GLN 7
ARG 8
0.0436
ARG 8
PRO 9
-0.0669
PRO 9
LEU 10
-0.0242
LEU 10
VAL 11
0.1009
VAL 11
THR 12
-0.0722
THR 12
ILE 13
0.0380
ILE 13
LYS 14
0.0443
LYS 14
ILE 15
-0.0517
ILE 15
GLY 16
0.0236
GLY 16
GLY 17
-0.0258
GLY 17
GLN 18
0.0509
GLN 18
LEU 19
-0.0449
LEU 19
LYS 20
0.0485
LYS 20
GLU 21
0.0414
GLU 21
ALA 22
0.0221
ALA 22
LEU 23
0.1524
LEU 23
LEU 24
-0.0621
LEU 24
ASP 25
-0.0730
ASP 25
THR 26
0.0282
THR 26
GLY 27
-0.0442
GLY 27
ALA 28
0.2699
ALA 28
ASP 29
-0.0105
ASP 29
ASP 30
0.3055
ASP 30
THR 31
0.0154
THR 31
VAL 32
-0.0702
VAL 32
LEU 33
0.0333
LEU 33
GLU 34
0.0038
GLU 34
GLU 35
-0.0036
GLU 35
MET 36
0.0148
MET 36
SER 37
0.0118
SER 37
LEU 38
-0.0394
LEU 38
PRO 39
-0.1223
PRO 39
GLY 40
-0.1242
GLY 40
ARG 41
0.6556
ARG 41
TRP 42
-0.4222
TRP 42
LYS 43
-0.0537
LYS 43
PRO 44
0.0557
PRO 44
LYS 45
0.0700
LYS 45
MET 46
0.1625
MET 46
ILE 47
0.0590
ILE 47
GLY 48
0.1187
GLY 48
GLY 49
0.0566
GLY 49
ILE 50
0.2510
ILE 50
GLY 51
0.0828
GLY 51
GLY 52
0.2163
GLY 52
PHE 53
0.2566
PHE 53
ILE 54
-0.0293
ILE 54
LYS 55
0.2490
LYS 55
VAL 56
0.0007
VAL 56
ARG 57
0.0655
ARG 57
GLN 58
-0.0603
GLN 58
TYR 59
-0.0464
TYR 59
ASP 60
-0.1458
ASP 60
GLN 61
0.0385
GLN 61
ILE 62
-0.0349
ILE 62
LEU 63
-0.0009
LEU 63
ILE 64
0.0107
ILE 64
GLU 65
0.0041
GLU 65
ILE 66
-0.0255
ILE 66
CYS 67
0.0395
CYS 67
GLY 68
-0.0004
GLY 68
HIS 69
-0.0398
HIS 69
LYS 70
0.0421
LYS 70
ALA 71
0.0272
ALA 71
ILE 72
0.1149
ILE 72
GLY 73
-0.0190
GLY 73
THR 74
-0.0925
THR 74
VAL 75
-0.0895
VAL 75
LEU 76
-0.1409
LEU 76
VAL 77
0.0674
VAL 77
GLY 78
-0.0027
GLY 78
PRO 79
0.0631
PRO 79
THR 80
-0.1102
THR 80
PRO 81
-0.0069
PRO 81
PHE 82
-0.1345
PHE 82
ASN 83
0.0004
ASN 83
VAL 84
0.0746
VAL 84
ILE 85
-0.1546
ILE 85
GLY 86
0.0016
GLY 86
ARG 87
0.0418
ARG 87
ASN 88
0.1477
ASN 88
LEU 89
-0.0374
LEU 89
LEU 90
0.1591
LEU 90
THR 91
-0.0657
THR 91
GLN 92
-0.1030
GLN 92
ILE 93
0.1243
ILE 93
GLY 94
-0.1983
GLY 94
CYS 95
-0.0631
CYS 95
THR 96
0.0005
THR 96
LEU 97
-0.0935
LEU 97
ASN 98
0.0388
ASN 98
PHE 99
0.0348
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.