This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
-0.0587
GLN 2
ILE 3
0.1327
ILE 3
THR 4
-0.1373
THR 4
LEU 5
-0.1309
LEU 5
TRP 6
0.0893
TRP 6
GLN 7
-0.0244
GLN 7
ARG 8
0.0827
ARG 8
PRO 9
-0.0377
PRO 9
LEU 10
0.0586
LEU 10
VAL 11
-0.1727
VAL 11
THR 12
-0.1304
THR 12
ILE 13
-0.0245
ILE 13
LYS 14
-0.0391
LYS 14
ILE 15
-0.0333
ILE 15
GLY 16
-0.0214
GLY 16
GLY 17
-0.0538
GLY 17
GLN 18
0.0135
GLN 18
LEU 19
-0.0807
LEU 19
LYS 20
0.0073
LYS 20
GLU 21
-0.1281
GLU 21
ALA 22
-0.0025
ALA 22
LEU 23
-0.0039
LEU 23
LEU 24
-0.0351
LEU 24
ASP 25
-0.0063
ASP 25
THR 26
-0.1670
THR 26
GLY 27
0.0133
GLY 27
ALA 28
-0.0312
ALA 28
ASP 29
-0.0038
ASP 29
ASP 30
0.0320
ASP 30
THR 31
-0.0120
THR 31
VAL 32
-0.0506
VAL 32
LEU 33
0.0088
LEU 33
GLU 34
-0.0042
GLU 34
GLU 35
-0.0040
GLU 35
MET 36
0.0320
MET 36
SER 37
0.0020
SER 37
LEU 38
0.0436
LEU 38
PRO 39
0.0031
PRO 39
GLY 40
-0.0500
GLY 40
ARG 41
-0.0440
ARG 41
TRP 42
-0.0080
TRP 42
LYS 43
-0.0081
LYS 43
PRO 44
-0.0556
PRO 44
LYS 45
0.0331
LYS 45
MET 46
-0.1139
MET 46
ILE 47
0.0637
ILE 47
GLY 48
0.0022
GLY 48
GLY 49
0.0144
GLY 49
ILE 50
-0.0542
ILE 50
GLY 51
0.0132
GLY 51
GLY 52
-0.0345
GLY 52
PHE 53
-0.0825
PHE 53
ILE 54
0.0716
ILE 54
LYS 55
-0.0203
LYS 55
VAL 56
-0.0108
VAL 56
ARG 57
-0.0181
ARG 57
GLN 58
-0.0286
GLN 58
TYR 59
-0.0577
TYR 59
ASP 60
0.0165
ASP 60
GLN 61
-0.0713
GLN 61
ILE 62
0.0193
ILE 62
LEU 63
-0.1059
LEU 63
ILE 64
-0.0171
ILE 64
GLU 65
-0.0342
GLU 65
ILE 66
-0.0046
ILE 66
CYS 67
-0.0241
CYS 67
GLY 68
-0.0554
GLY 68
HIS 69
0.0548
HIS 69
LYS 70
-0.1621
LYS 70
ALA 71
0.0019
ALA 71
ILE 72
-0.0643
ILE 72
GLY 73
-0.0197
GLY 73
THR 74
-0.0560
THR 74
VAL 75
-0.0083
VAL 75
LEU 76
-0.0286
LEU 76
VAL 77
-0.0074
VAL 77
GLY 78
-0.0008
GLY 78
PRO 79
-0.0168
PRO 79
THR 80
-0.0116
THR 80
PRO 81
-0.0974
PRO 81
VAL 82
0.0893
VAL 82
ASN 83
0.0118
ASN 83
ILE 84
-0.0570
ILE 84
ILE 85
-0.0427
ILE 85
GLY 86
-0.0250
GLY 86
ARG 87
-0.0315
ARG 87
ASN 88
0.0811
ASN 88
LEU 89
-0.0025
LEU 89
LEU 90
0.0185
LEU 90
THR 91
0.0015
THR 91
GLN 92
0.0187
GLN 92
ILE 93
-0.0299
ILE 93
GLY 94
0.0857
GLY 94
CYS 95
-0.0595
CYS 95
THR 96
0.0248
THR 96
LEU 97
0.0322
LEU 97
ASN 98
-0.0232
ASN 98
PHE 99
-0.0138
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.