This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
-0.0152
GLN 2
ILE 3
0.0845
ILE 3
THR 4
-0.0629
THR 4
LEU 5
-0.0148
LEU 5
TRP 6
-0.1081
TRP 6
GLN 7
0.0914
GLN 7
ARG 8
0.0136
ARG 8
PRO 9
-0.0987
PRO 9
LEU 10
0.1158
LEU 10
VAL 11
-0.0532
VAL 11
THR 12
0.0359
THR 12
ILE 13
-0.0132
ILE 13
LYS 14
0.0049
LYS 14
ILE 15
0.0034
ILE 15
GLY 16
0.0115
GLY 16
GLY 17
0.0159
GLY 17
GLN 18
-0.0168
GLN 18
LEU 19
0.0418
LEU 19
LYS 20
-0.0134
LYS 20
GLU 21
0.0924
GLU 21
ALA 22
-0.0515
ALA 22
LEU 23
-0.0525
LEU 23
LEU 24
0.0110
LEU 24
ASP 25
0.1081
ASP 25
THR 26
-0.1203
THR 26
GLY 27
-0.1495
GLY 27
ALA 28
-0.1744
ALA 28
ASP 29
0.0619
ASP 29
ASP 30
-0.0831
ASP 30
THR 31
-0.0069
THR 31
VAL 32
0.0439
VAL 32
LEU 33
0.0007
LEU 33
GLU 34
-0.0210
GLU 34
GLU 35
0.0453
GLU 35
MET 36
-0.0471
MET 36
SER 37
0.0196
SER 37
LEU 38
-0.0148
LEU 38
PRO 39
-0.0056
PRO 39
GLY 40
0.0317
GLY 40
ARG 41
0.0415
ARG 41
TRP 42
-0.0058
TRP 42
LYS 43
0.0231
LYS 43
PRO 44
-0.0649
PRO 44
LYS 45
-0.0068
LYS 45
MET 46
0.0034
MET 46
ILE 47
0.0122
ILE 47
GLY 48
0.2494
GLY 48
GLY 49
0.0969
GLY 49
ILE 50
0.0990
ILE 50
GLY 51
-0.0447
GLY 51
GLY 52
0.0045
GLY 52
PHE 53
-0.1052
PHE 53
ILE 54
0.0842
ILE 54
LYS 55
-0.2391
LYS 55
VAL 56
-0.0240
VAL 56
ARG 57
-0.0338
ARG 57
GLN 58
-0.0089
GLN 58
TYR 59
0.0131
TYR 59
ASP 60
0.0133
ASP 60
GLN 61
-0.0025
GLN 61
ILE 62
0.0042
ILE 62
LEU 63
-0.0230
LEU 63
ILE 64
0.0004
ILE 64
GLU 65
-0.0019
GLU 65
ILE 66
0.0035
ILE 66
CYS 67
0.0411
CYS 67
GLY 68
-0.0163
GLY 68
HIS 69
0.0661
HIS 69
LYS 70
-0.1438
LYS 70
ALA 71
-0.0052
ALA 71
ILE 72
-0.0345
ILE 72
GLY 73
-0.0040
GLY 73
THR 74
0.0296
THR 74
VAL 75
0.0139
VAL 75
LEU 76
0.0699
LEU 76
VAL 77
-0.0262
VAL 77
GLY 78
-0.0082
GLY 78
PRO 79
0.0010
PRO 79
THR 80
0.0627
THR 80
PRO 81
-0.0150
PRO 81
VAL 82
0.0750
VAL 82
ASN 83
-0.0055
ASN 83
ILE 84
-0.0524
ILE 84
ILE 85
0.0178
ILE 85
GLY 86
0.0243
GLY 86
ARG 87
0.0079
ARG 87
ASN 88
-0.0810
ASN 88
LEU 89
0.0252
LEU 89
LEU 90
-0.0260
LEU 90
THR 91
-0.0315
THR 91
GLN 92
-0.0205
GLN 92
ILE 93
-0.0258
ILE 93
GLY 94
0.0692
GLY 94
CYS 95
-0.1525
CYS 95
THR 96
0.1886
THR 96
LEU 97
0.0011
LEU 97
ASN 98
-0.1625
ASN 98
PHE 99
-0.0176
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.