This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
0.0711
GLN 2
ILE 3
0.0729
ILE 3
THR 4
-0.1160
THR 4
LEU 5
-0.1017
LEU 5
TRP 6
0.1007
TRP 6
GLN 7
-0.0683
GLN 7
ARG 8
0.0969
ARG 8
PRO 9
0.0249
PRO 9
LEU 10
0.0204
LEU 10
VAL 11
-0.0999
VAL 11
THR 12
-0.0221
THR 12
ILE 13
-0.0150
ILE 13
LYS 14
-0.0216
LYS 14
ILE 15
0.0195
ILE 15
GLY 16
-0.0222
GLY 16
GLY 17
-0.0115
GLY 17
GLN 18
0.0100
GLN 18
LEU 19
-0.0047
LEU 19
LYS 20
0.0018
LYS 20
GLU 21
-0.0827
GLU 21
ALA 22
0.0074
ALA 22
LEU 23
0.0164
LEU 23
LEU 24
-0.0637
LEU 24
ASP 25
0.0573
ASP 25
THR 26
-0.2111
THR 26
GLY 27
-0.1040
GLY 27
ALA 28
-0.0626
ALA 28
ASP 29
0.0384
ASP 29
ASP 30
-0.0041
ASP 30
THR 31
0.0206
THR 31
VAL 32
-0.0583
VAL 32
LEU 33
-0.0450
LEU 33
GLU 34
0.0226
GLU 34
GLU 35
-0.0707
GLU 35
MET 36
0.0613
MET 36
SER 37
-0.0238
SER 37
LEU 38
0.0124
LEU 38
PRO 39
-0.0170
PRO 39
GLY 40
-0.0198
GLY 40
ARG 41
-0.0110
ARG 41
TRP 42
-0.0140
TRP 42
LYS 43
-0.0267
LYS 43
PRO 44
0.0619
PRO 44
LYS 45
-0.0392
LYS 45
MET 46
0.0423
MET 46
ILE 47
-0.0837
ILE 47
GLY 48
-0.3097
GLY 48
GLY 49
-0.0767
GLY 49
ILE 50
-0.0722
ILE 50
GLY 51
0.0438
GLY 51
GLY 52
0.0380
GLY 52
PHE 53
0.1504
PHE 53
ILE 54
0.0396
ILE 54
LYS 55
0.2551
LYS 55
VAL 56
0.0152
VAL 56
ARG 57
0.0185
ARG 57
GLN 58
0.0172
GLN 58
TYR 59
-0.0027
TYR 59
ASP 60
0.0003
ASP 60
GLN 61
0.0078
GLN 61
ILE 62
-0.0265
ILE 62
LEU 63
0.0103
LEU 63
ILE 64
-0.0140
ILE 64
GLU 65
-0.0116
GLU 65
ILE 66
0.0014
ILE 66
CYS 67
0.0137
CYS 67
GLY 68
-0.0220
GLY 68
HIS 69
0.0387
HIS 69
LYS 70
-0.0534
LYS 70
ALA 71
-0.0237
ALA 71
ILE 72
0.0122
ILE 72
GLY 73
-0.0347
GLY 73
THR 74
-0.0903
THR 74
VAL 75
0.0134
VAL 75
LEU 76
-0.0615
LEU 76
VAL 77
-0.0178
VAL 77
GLY 78
0.0271
GLY 78
PRO 79
-0.0174
PRO 79
THR 80
-0.0960
THR 80
PRO 81
0.0279
PRO 81
VAL 82
-0.0145
VAL 82
ASN 83
0.0192
ASN 83
ILE 84
-0.0180
ILE 84
ILE 85
-0.0595
ILE 85
GLY 86
-0.0028
GLY 86
ARG 87
-0.0192
ARG 87
ASN 88
0.1088
ASN 88
LEU 89
-0.0457
LEU 89
LEU 90
0.0544
LEU 90
THR 91
0.0325
THR 91
GLN 92
0.0067
GLN 92
ILE 93
-0.0137
ILE 93
GLY 94
0.1245
GLY 94
CYS 95
-0.1026
CYS 95
THR 96
0.1267
THR 96
LEU 97
0.0858
LEU 97
ASN 98
-0.0768
ASN 98
PHE 99
0.0085
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.